RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FOXL1Q12952 345 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 MADCAM1Q13477 382 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 HABP2Q14520 560 aaPredicted RBP7.74□□□□□ -1.17
SRP54-210ENST00000556380 ARL6IP1Q15041 203 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 CDNFQ49AH0 187 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 Q6ZSV7 163 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 MOB1BQ7L9L4 216 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 THNSL2Q86YJ6 484 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 PRR18Q8N4B5 295 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 OR10V1Q8NGI7 309 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 SLC25A46Q96AG3 418 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 GALMQ96C23 342 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 YPEL2Q96QA6 119 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 CMSS1Q9BQ75 279 aaKnown RBP7.74□□□□□ -1.17
SRP54-210ENST00000556380 ATG5Q9H1Y0 275 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 C16orf95Q9H693 158 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 CHMP1AQ9HD42 196 aaPredicted RBP7.74□□□□□ -1.17
SRP54-210ENST00000556380 OR2S2Q9NQN1 319 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 RHBDL2Q9NX52 303 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 ABRACLQ9P1F3 81 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 GNG12Q9UBI6 72 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 ELF5Q9UKW6 265 aaPredicted RBP7.74□□□□□ -1.17
SRP54-210ENST00000556380 SPATA2Q9UM82 520 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 AMMECR1Q9Y4X0 333 aaPredicted RBP7.74□□□□□ -1.17
SRP54-210ENST00000556380 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
SRP54-210ENST00000556380 SERPINE3A8MV23 424 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 TRDCB7Z8K6 153 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 SCTP09683 121 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 MDKP21741 143 aaPredicted RBP7.73□□□□□ -1.17
SRP54-210ENST00000556380 PPP1CCP36873 323 aaKnown RBP7.73□□□□□ -1.17
SRP54-210ENST00000556380 SERPINB10P48595 397 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 RAG2P55895 527 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 ZNF816Q0VGE8 651 aaPredicted RBP7.73□□□□□ -1.17
SRP54-210ENST00000556380 SRSF7Q16629 238 aaKnown RBP eCLIP7.73□□□□□ -1.17
SRP54-210ENST00000556380 ZNF260Q3ZCT1 412 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 GPR107Q5VW38 600 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 HACD4Q5VWC8 232 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 CCDC144NLQ6NUI1 221 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 Q6ZS49 121 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 ODF3L1Q8IXM7 274 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 OR10X1Q8NGY0 326 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 LINC01006Q8NI28 216 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 CFHR4Q92496 578 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 TOLLIPQ9H0E2 274 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 ABCB10Q9NRK6 738 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 MGAT4AQ9UM21 535 aa7.73□□□□□ -1.17
SRP54-210ENST00000556380 IGKV1D-8A0A087WSZ0 117 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 A0A0A6YYH2 397 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 CLPSL1A2RUU4 121 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 A6NJ64 397 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 ITGB1BP1O14713 200 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 TIMM23O14925 209 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 EREGO14944 169 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 SSX5O60225 188 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 CRYBA1P05813 215 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 FCGR3AP08637 254 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
SRP54-210ENST00000556380 CD3GP09693 182 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 CD24P25063 80 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 BRS3P32247 399 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 KIR2DS4P43632 304 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 RAB7AP51149 207 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 HLA-DRB3P79483 266 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 HERPUD1Q15011 391 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 DHRS7BQ6IAN0 325 aaPredicted RBP7.72□□□□□ -1.17
SRP54-210ENST00000556380 C12orf54Q6X4T0 127 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 TMEM219Q86XT9 240 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 OR8H3Q8N146 312 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 DRAM1Q8N682 238 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 OR4F5Q8NH21 305 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 SETD6Q8TBK2 473 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 RPEQ96AT9 228 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 AGMATQ9BSE5 352 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 ZNF747Q9BV97 191 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 PARP12Q9H0J9 701 aaKnown RBP7.72□□□□□ -1.17
SRP54-210ENST00000556380 ABCG5Q9H222 651 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 BEX1Q9HBH7 125 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 RAB18Q9NP72 206 aa7.72□□□□□ -1.17
SRP54-210ENST00000556380 ZNF230Q9UIE0 474 aaPredicted RBP7.72□□□□□ -1.17
SRP54-210ENST00000556380 FBN3Q75N90 2809 aa7.71□□□□□ -1.17
SRP54-210ENST00000556380 A0A075B6Q4 140 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 IGHV1-3A0A0C4DH29 117 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 A0A1B0GUS0 222 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 TMEM235A6NFC5 223 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 FABP7O15540 132 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 GAPDHP04406 335 aaKnown RBP7.71□□□□□ -1.18
SRP54-210ENST00000556380 AMY1AP04745 511 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 AMY2AP04746 511 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 GSTT2P0CG29 244 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 GSTT2BP0CG30 244 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 DTYMKP23919 212 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 MNDAP41218 407 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 RPL5P46777 297 aaKnown RBP7.71□□□□□ -1.18
SRP54-210ENST00000556380 PROK1P58294 105 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 EBI3Q14213 229 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 PNLIPRP3Q17RR3 467 aa7.71□□□□□ -1.18
SRP54-210ENST00000556380 Q8N2B8 174 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 222.4 ms