RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NXF2Q9GZY0 626 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 COMMD4Q9H0A8 199 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SYT4Q9H2B2 425 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ZDHHC11Q9H8X9 412 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 PROK2Q9HC23 129 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ANKHQ9HCJ1 492 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SH2D2AQ9NP31 389 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 HMG20AQ9NP66 347 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SIRT7Q9NRC8 400 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 FGFR1OP2Q9NVK5 253 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 B3GNT2Q9NY97 397 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 GSKIPQ9P0R6 139 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF391Q9UJN7 358 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 DKKL1Q9UK85 242 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 IKZF2Q9UKS7 526 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 HSPB11Q9Y547 144 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 WNK2Q9Y3S1 2297 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 NOTCH1P46531 2555 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 PSMB11A5LHX3 300 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LINC00862A6NCI5 91 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LRIT2A6NDA9 550 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 CENPXA8MT69 81 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 FAM166BA8MTA8 275 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 H0Y980 276 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 H3BQF6 201 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TPST1O60507 370 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 GGCTO75223 188 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 UGT2B11O75310 529 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OR2J2O76002 312 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SUPT7LO94864 414 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TOXO94900 526 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LRATO95237 230 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ORM1P02763 201 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SFTPBP07988 381 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TSPAN19P0C672 248 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 CCL3P10147 92 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 HIST1H1CP16403 213 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 HLA-GP17693 338 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 PMCHP20382 165 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ATP6V1B2P21281 511 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TBXA2RP21731 343 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RPL35P42766 123 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 MAGEA5P43359 124 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OR3A4PP47883 348 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 AKR1D1P51857 326 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 HNRNPA3P51991 378 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LIM2P55344 173 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RAB2AP61019 212 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RAB10P61026 200 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RPS4XP62701 263 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RAP1AP62834 184 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 IL5RAQ01344 420 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OC90Q02509 493 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TLE4Q04727 773 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 EMX2Q04743 252 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ZP4Q12836 540 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 BIKQ13323 160 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TSNQ15631 228 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ATP6AP1Q15904 470 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SYPL1Q16563 259 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 CYP51A1Q16850 503 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RFX4Q33E94 735 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ACSM3Q53FZ2 586 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 PDZD11Q5EBL8 140 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SPANXN3Q5MJ09 141 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 RBM48Q5RL73 367 aaKnown RBP3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TIMM23BQ5SRD1 257 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SAXO2Q658L1 398 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 FAM71F2Q6NXP2 309 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 XKRXQ6PP77 449 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 DRAM2Q6UX65 266 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 C10orf107Q8IVU9 208 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 WDFY1Q8IWB7 410 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 C9orf40Q8IXQ3 194 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM123Q8N131 208 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF283Q8N7M2 679 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LRRC75AQ8NAA5 344 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 LFNGQ8NES3 379 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 ATP6V1C2Q8NEY4 427 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OR4F15Q8NGB8 312 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OR10X1Q8NGY0 326 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 FAM57AQ8TBR7 257 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 DOK4Q8TEW6 326 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM234Q8WY98 164 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TLCD1Q96CP7 247 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 WDR34Q96EX3 536 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 PHB2Q99623 299 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 MICU1Q9BPX6 476 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TTTY12Q9BZ98 90 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 NRN1Q9NPD7 142 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 NIT2Q9NQR4 276 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 TAS2R13Q9NYV9 303 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 GLTPQ9NZD2 209 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 SNX12Q9UMY4 172 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 WDR45Q9Y484 360 aa3.12□□□□□ -1.91
PRPF39-209ENST00000556353 OARD1Q9Y530 152 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms