RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RGS11O94810 467 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 LPLP06858 475 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 RAB6AP20340 208 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
SLIRP-205ENST00000556310 VDAC2P45880 294 aaPredicted RBP9.2□□□□□ -0.94
SLIRP-205ENST00000556310 REG1BP48304 166 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 ZNF134P52741 427 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 TMEM50BP56557 158 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 PLA2G7Q13093 441 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 HES1Q14469 280 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 MORN2Q502X0 79 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 CT45A1Q5HYN5 189 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 LY6G6FQ5SQ64 297 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 Q6ZS46 218 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 TPRA1Q86W33 373 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 NR2C2APQ86WQ0 139 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 IZUMO1Q8IYV9 350 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 CT45A3Q8NHU0 189 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 RTN4IP1Q8WWV3 396 aaPredicted RBP9.2□□□□□ -0.94
SLIRP-205ENST00000556310 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 YPEL2Q96QA6 119 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
SLIRP-205ENST00000556310 ABHD14AQ9BUJ0 271 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 PECRQ9BY49 303 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 MGAT4AQ9UM21 535 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 A0A0B4J203 849 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 TNFAIP8O95379 198 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 IGKV1D-33P01593 117 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 IGKV1-33P01594 117 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 AMY1AP04745 511 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 AMY2AP04746 511 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 TMEM11P17152 192 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 HLA-DRB3P79483 266 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 EBI3Q14213 229 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 C2orf68Q2NKX9 166 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 TMEM95Q3KNT9 176 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 ABCA11PQ4W5N1 156 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 PLAC9Q5JTB6 97 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 C5orf24Q7Z6I8 188 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 MOB3BQ86TA1 216 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 TGIF2LXQ8IUE1 241 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 SETD6Q8TBK2 473 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-205ENST00000556310 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 PTX4Q96A99 478 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 RAB3CQ96E17 227 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 KCTD7Q96MP8 289 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 CMSS1Q9BQ75 279 aaKnown RBP9.19□□□□□ -0.94
SLIRP-205ENST00000556310 CHCHD6Q9BRQ6 235 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 OR51E2Q9H255 320 aa9.19□□□□□ -0.94
SLIRP-205ENST00000556310 A0A087WXM4 84 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 SMIM30A4D0T7 59 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 METTL21EPA6NDL7 271 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 RAB27BO00194 218 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 MFNGO00587 321 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 FGF16O43320 207 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 LANCL1O43813 399 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 PEX14O75381 377 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 SLC2A2P11168 524 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-205ENST00000556310 CD36P16671 472 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 GADD45AP24522 165 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 CD1BP29016 333 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 MOGAT2Q3SYC2 334 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 Q8N6K4 173 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 TSPAN14Q8NG11 270 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 OR2AK2Q8NG84 335 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 OR10R2Q8NGX6 335 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 MMP27Q9H306 513 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 Q9N2K0 584 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 VCX3AQ9NNX9 186 aa9.18□□□□□ -0.94
SLIRP-205ENST00000556310 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 IGHV3-72A0A0B4J1Y9 119 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 LOC100506127A0A0U1RQW1 187 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 TSPAN15O95858 294 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 CD3GP09693 182 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 HIST1H1DP16402 221 aaKnown RBP9.17□□□□□ -0.94
SLIRP-205ENST00000556310 SDC2P34741 201 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 MRPS15P82914 257 aaKnown RBP9.17□□□□□ -0.94
SLIRP-205ENST00000556310 TIMM50Q3ZCQ8 353 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 FAM71F2Q6NXP2 309 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 SFXN4Q6P4A7 337 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 ODF3L1Q8IXM7 274 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 C11orf44Q8N8P7 122 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 OR2T10Q8NGZ9 312 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
SLIRP-205ENST00000556310 IFI27L2Q9H2X8 130 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
SLIRP-205ENST00000556310 SAA2-SAA4A0A096LPE2 208 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
SLIRP-205ENST00000556310 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 ITGB1BP1O14713 200 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
SLIRP-205ENST00000556310 MOSP00540 346 aa9.16□□□□□ -0.94
SLIRP-205ENST00000556310 CSF1P09603 554 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms