RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ZNF69Q9UC07 566 aa6.22□□□□□ -1.41
TDP1-214ENST00000556063 MTFP1Q9UDX5 166 aa6.22□□□□□ -1.41
TDP1-214ENST00000556063 ZNF107Q9UII5 783 aaPredicted RBP6.22□□□□□ -1.41
TDP1-214ENST00000556063 RBM7Q9Y580 266 aaKnown RBP6.22□□□□□ -1.41
TDP1-214ENST00000556063 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
TDP1-214ENST00000556063 TRBV6-7A0A0A0MS04 114 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 MEIS3P1A6NDR6 274 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 BTBD17A6NE02 478 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 ODF3BA8MYP8 253 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 ZNF736B4DX44 427 aaPredicted RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 BUB1B-PAK6H3BSN5 160 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 IGLV1-47P01700 117 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 IGHV3-7P01780 117 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 CSF1P09603 554 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 NAT1P18440 290 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 PPP1CCP36873 323 aaKnown RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 INPP1P49441 399 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 TAS2R19P59542 299 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 AP3S2P59780 193 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 PRB3Q04118 309 aaPredicted RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 CDK10Q15131 360 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 IGSF11Q5DX21 431 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 RNASE12Q5GAN4 147 aaKnown RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 RUSC1-AS1Q66K80 236 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 Q6ZPA2 131 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 SLC25A48Q6ZT89 311 aaKnown RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 CCDC190Q86UF4 302 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 TMEM17Q86X19 198 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 GVQW1Q8N7I0 195 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 OR5AP2Q8NGF4 316 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 OR52I2Q8NH67 350 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 S100ZQ8WXG8 99 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 GCDHQ92947 438 aaPredicted RBP6.21□□□□□ -1.42
TDP1-214ENST00000556063 LEAP2Q969E1 77 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 RPEQ96AT9 228 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 CYYR1Q96J86 154 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 S1PR3Q99500 378 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 SOSTQ9BQB4 213 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 ABHD14AQ9BUJ0 271 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 RDH8Q9NYR8 311 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 PIPOXQ9P0Z9 390 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 ZNF221Q9UK13 617 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 ANAPC10Q9UM13 185 aa6.21□□□□□ -1.42
TDP1-214ENST00000556063 C2CD3Q4AC94 2353 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 IGKV1D-8A0A087WSZ0 117 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 IGKV1-6A0A0C4DH72 117 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 A0A0U1RQK1 487 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 RAB29O14966 203 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 TXNL1O43396 289 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 GSTZ1O43708 216 aaPredicted RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 SLC22A5O76082 557 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 GAPDHP04406 335 aaKnown RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 IFNA6P05013 189 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 FCER2P06734 321 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR5H8P0DN80 308 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 HLA-DMAP28067 261 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 BRS3P32247 399 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 FAUP35544 74 aaKnown RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 LUMP51884 338 aaPredicted RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 HERV-K104P61576 105 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 TSPAN5P62079 268 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 DGCR2P98153 550 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 GNMTQ14749 295 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 HERPUD1Q15011 391 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 SSX2Q16385 188 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 AANATQ16613 207 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 RNASE10Q5GAN6 216 aaKnown RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 CT45A1Q5HYN5 189 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 H1FOOQ8IZA3 346 aaPredicted RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR8H3Q8N146 312 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 LYG1Q8N1E2 194 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 GDPD1Q8N9F7 314 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 TMEM229BQ8NBD8 167 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 ZNF439Q8NDP4 499 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR4P4Q8NGL7 312 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR6F1Q8NGZ6 308 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 CT45A3Q8NHU0 189 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 C22orf15Q8WYQ4 148 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 BORCS5Q969J3 196 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 TOMM40LQ969M1 308 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 TOLLIPQ9H0E2 274 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 C11orf54Q9H0W9 315 aaPredicted RBP6.2□□□□□ -1.42
TDP1-214ENST00000556063 DPAGT1Q9H3H5 408 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 ABCB10Q9NRK6 738 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 EHFQ9NZC4 300 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR1A1Q9P1Q5 309 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 KLK11Q9UBX7 282 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 OR2W1Q9Y3N9 320 aa6.2□□□□□ -1.42
TDP1-214ENST00000556063 A0A1W2PPE3 182 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 HSD17B6O14756 317 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 ST8SIA5O15466 376 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 LANCL1O43813 399 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 RAB3DO95716 219 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 PMP2P02689 132 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 OR8U9P0C7N5 309 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 AKAIN1P0CW23 69 aa6.19□□□□□ -1.42
TDP1-214ENST00000556063 NFYAP23511 347 aaPredicted RBP6.19□□□□□ -1.42
TDP1-214ENST00000556063 FCGR2CP31995 323 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms