RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 HAND1O96004 215 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 IFNA1P01562 189 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
SHMT2-222ENST00000555774 OR2B8PP59922 312 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 TMEM41BQ5BJD5 291 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 PRR18Q8N4B5 295 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 WDR61Q9GZS3 305 aaKnown RBP11.38□□□□□ -0.59
SHMT2-222ENST00000555774 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 CDIPTO14735 213 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 WDR1O75083 606 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 TNFSF15O95150 251 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 CBR1P16152 277 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-222ENST00000555774 SPINK2P20155 84 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 CEBPGP53567 150 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 SOX8P57073 446 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 ARG2P78540 354 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 ELOBQ15370 118 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 IZUMO4Q1ZYL8 232 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 TCTEX1D1Q8N7M0 179 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 NANPQ8TBE9 248 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 RSG1Q9BU20 258 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 TMEM242Q9NWH2 141 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
SHMT2-222ENST00000555774 TRAV39A0A0B4J263 110 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 NQO2P16083 231 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 IGHV1-2P23083 117 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 TUBG1P23258 451 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 ARL16Q0P5N6 197 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 TMEM14EPQ6UXP3 125 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 RBMS3Q6XE24 437 aaKnown RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 MYPOPQ86VE0 399 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 FGFRL1Q8N441 504 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 TUBG2Q9NRH3 451 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 TGOLN2O43493 480 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 CELA3BP08861 270 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 CATR1Q13166 79 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 FAM90A2PQ658T7 463 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-222ENST00000555774 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 OR13D1Q8NGV5 346 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 GALMQ96C23 342 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 CLCF1Q9UBD9 225 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 ARHGAP21Q5T5U3 1957 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
SHMT2-222ENST00000555774 OOEPA6NGQ2 149 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF891A8MT65 544 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 C3orf80F5H4A9 247 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 CDX4O14627 284 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 FBP1P09467 338 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 P0C879 139 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 Q8WTZ3 238 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 TAF15Q92804 592 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 RCC1LQ96I51 464 aaKnown RBP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 VAX2Q9UIW0 290 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 CNTRLQ7Z7A1 2325 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF727A8MUV8 499 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 PSG7Q13046 419 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 EIF4EBP1Q13541 118 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-222ENST00000555774 IGFBP7Q16270 282 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 SPANXN5Q5MJ07 72 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 SLC16A13Q7RTY0 426 aa11.36□□□□□ -0.59
SHMT2-222ENST00000555774 CLN5O75503 358 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 IGHG3P01860 377 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 HOXA5P20719 270 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 ERVS71-1P61550 626 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 RAB11AP62491 216 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 Q6ZT83 130 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF610Q8N9Z0 462 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 CA5BP1Q8WTZ4 195 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 OR4C12Q96R67 309 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 RBKSQ9H477 322 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 ZFP92A6NM28 416 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 C12orf77C9JDV5 145 aa11.35□□□□□ -0.59
SHMT2-222ENST00000555774 CYB5R3P00387 301 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms