RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FNDC9Q8TBE3 224 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 MAP1LC3CQ9BXW4 147 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 RGCCQ9H4X1 137 aa0.08□□□□□ -2.4
SNX6-204ENST00000555541 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
SNX6-204ENST00000555541 PGLYRP1O75594 196 aaPredicted RBP0.07□□□□□ -2.4
SNX6-204ENST00000555541 EPPINO95925 133 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 CRPP02741 224 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 TMEM258P61165 79 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 TMEM155Q4W5P6 130 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 FP248Q71RG6 208 aaPredicted RBP0.07□□□□□ -2.4
SNX6-204ENST00000555541 LINC00523Q86TU6 105 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 LHFPL1Q86WI0 220 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 ZBTB8OSQ8IWT0 167 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 ANGPTL6Q8NI99 470 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 CDKL2Q92772 493 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 GOLPH3Q9H4A6 298 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 HAUS4Q9H6D7 363 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 ANKHQ9HCJ1 492 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 DSCAMO60469 2012 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 NAV2Q8IVL1 2488 aa0.07□□□□□ -2.4
SNX6-204ENST00000555541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.06□□□□□ -2.4
SNX6-204ENST00000555541 MEIKINA0A087WXM9 373 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 UBDO15205 165 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 STAG3L3P0CL85 134 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 SRMP19623 302 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 TMEM42Q69YG0 159 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 HBMQ6B0K9 141 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 TMCO2Q7Z6W1 182 aaPredicted RBP0.06□□□□□ -2.4
SNX6-204ENST00000555541 SLC35E3Q7Z769 313 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 RPS19BP1Q86WX3 136 aaKnown RBP0.06□□□□□ -2.4
SNX6-204ENST00000555541 OR6K2Q8NGY2 324 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 OR2AE1Q8NHA4 323 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 CST9LQ9H4G1 147 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 SNX12Q9UMY4 172 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 MYO15BQ96JP2 1530 aa0.06□□□□□ -2.4
SNX6-204ENST00000555541 MDFIC2A0A1B0GVS7 189 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 OR5K4A6NMS3 321 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 CCL3P10147 92 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 NPPCP23582 126 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 PEX19P40855 299 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 XCL1P47992 114 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 DNASE1L1P49184 302 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 CTBP2P56545 445 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 SLC36A2Q495M3 483 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 HENMT1Q5T8I9 393 aaKnown RBP0.05□□□□□ -2.4
SNX6-204ENST00000555541 OR10K2Q6IF99 312 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 FAHD1Q6P587 224 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 YIPF7Q8N8F6 280 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 LFNGQ8NES3 379 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 OR5D18Q8NGL1 313 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 OR11L1Q8NGX0 322 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 TOP1MTQ969P6 601 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 ADAT1Q9BUB4 502 aaKnown RBP0.05□□□□□ -2.4
SNX6-204ENST00000555541 SYT4Q9H2B2 425 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 METTL17Q9H7H0 456 aaPredicted RBP0.05□□□□□ -2.4
SNX6-204ENST00000555541 HHLA3Q9XRX5 114 aa0.05□□□□□ -2.4
SNX6-204ENST00000555541 TRGV5A0A0B4J1U4 118 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 ZMPSTE24O75844 475 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 GIMD1P0DJR0 217 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 AKR1C4P17516 323 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 FGF12P61328 243 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 EMX1Q04741 257 aaPredicted RBP0.04□□□□□ -2.4
SNX6-204ENST00000555541 PAFAH1B3Q15102 231 aaKnown RBP0.04□□□□□ -2.4
SNX6-204ENST00000555541 FAM43BQ6ZT52 329 aaPredicted RBP0.04□□□□□ -2.4
SNX6-204ENST00000555541 C15orf53Q8NAA6 179 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 MIEN1Q9BRT3 115 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 COPS4Q9BT78 406 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 CHST5Q9GZS9 411 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 GTSF1LQ9H1H1 148 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 RABL2BQ9UNT1 228 aa0.04□□□□□ -2.4
SNX6-204ENST00000555541 ZFC3H1O60293 1989 aaKnown RBP0.04□□□□□ -2.4
SNX6-204ENST00000555541 FAT4Q6V0I7 4981 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 LINC00862A6NCI5 91 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 E7EWF7 191 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 RFXANKO14593 260 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 SCN2BO60939 215 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 NPPAP01160 153 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 RPSAP08865 295 aaKnown RBP0.03□□□□□ -2.4
SNX6-204ENST00000555541 LRRC75BQ2VPJ9 315 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 FAM19A2Q8N3H0 131 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 CYGBQ8WWM9 190 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 CIB1Q99828 191 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 FBXO44Q9H4M3 255 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 NRBP2Q9NSY0 501 aa0.03□□□□□ -2.4
SNX6-204ENST00000555541 IGKV1D-42A0A075B6H8 117 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 IGHV3-64A0A075B6Q5 118 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 CDK14O94921 469 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 IGHV1-69P01742 117 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 BPGMP07738 259 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 CD24P25063 80 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 ATP6V0CP27449 155 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 RPA3P35244 121 aaPredicted RBP0.02□□□□□ -2.41
SNX6-204ENST00000555541 ACTR1BP42025 376 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 SERPINB10P48595 397 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 SULT1A2P50226 295 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 GBE1Q04446 702 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 TRAM1Q15629 374 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 TRIP13Q15645 432 aaPredicted RBP0.02□□□□□ -2.41
SNX6-204ENST00000555541 SPATA8Q6RVD6 105 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms