RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 PEMTQ9UBM1 199 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 PEF1Q9UBV8 284 aaKnown RBP7.24□□□□□ -1.25
SCFD1-215ENST00000555259 HERC1Q15751 4861 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 H3BUA1 57 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ATF4P18848 351 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-215ENST00000555259 OR3A3P47888 321 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 CCR9P51686 369 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ADARB1P78563 741 aaKnown RBP7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ALKBH1Q13686 389 aaKnown RBP7.23□□□□□ -1.25
SCFD1-215ENST00000555259 TRIM25Q14258 630 aaKnown RBP7.23□□□□□ -1.25
SCFD1-215ENST00000555259 GNMTQ14749 295 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 RPEL1Q2QD12 228 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 MORN2Q502X0 79 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ATAD3CQ5T2N8 411 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 SYT6Q5T7P8 510 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-215ENST00000555259 FDX2Q6P4F2 183 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 FAM131AQ6UXB0 335 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF562Q6V9R5 426 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ASCL4Q6XD76 172 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 SERPINA12Q8IW75 414 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 ADGRG5Q8IZF4 528 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 OR5D14Q8NGL3 314 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 OR52N1Q8NH53 320 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 NEK7Q8TDX7 302 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 DNAJC9Q8WXX5 260 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 CLCC1Q96S66 551 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 GPER1Q99527 375 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 GGTLC1Q9BX51 225 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 OR2S2Q9NQN1 319 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 TAGLN3Q9UI15 199 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 TRAPPC2LQ9UL33 140 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 PKD1P98161 4303 aa7.23□□□□□ -1.25
SCFD1-215ENST00000555259 SAA2-SAA4A0A096LPE2 208 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 OR4C45A6NMZ5 311 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 AIREO43918 545 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 MITFO75030 526 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-215ENST00000555259 CDRT1O95170 752 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 CA2P00918 260 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 SAA2P0DJI9 122 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-215ENST00000555259 EPHA2P29317 976 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 ATP6V1E1P36543 226 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 C6orf183Q5T699 404 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 C12orf73Q69YU5 71 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF343Q6P1L6 599 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 STX19Q8N4C7 294 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 PARP16Q8N5Y8 322 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 OR4K15Q8NH41 348 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 PHLDA1Q8WV24 401 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-215ENST00000555259 CPNE2Q96FN4 548 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-215ENST00000555259 ARL8BQ9NVJ2 186 aa7.22□□□□□ -1.25
SCFD1-215ENST00000555259 RCC2Q9P258 522 aaKnown RBP7.22□□□□□ -1.25
SCFD1-215ENST00000555259 LOC102724200A0A096LPH7 203 aaPredicted RBP7.21□□□□□ -1.25
SCFD1-215ENST00000555259 MSGN1A6NI15 193 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 ZAR1LA6NP61 321 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 FADS2O95864 444 aaKnown RBP7.21□□□□□ -1.25
SCFD1-215ENST00000555259 FAM107AO95990 144 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 HTR1AP08908 422 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 RCC1P18754 421 aaPredicted RBP7.21□□□□□ -1.25
SCFD1-215ENST00000555259 BMI1P35226 326 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 DAPP51397 102 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 DEFA5Q01523 94 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 GUCA2BQ16661 112 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 MPV17LQ2QL34 196 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 DEFB114Q30KQ6 69 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 LINC00596Q86U02 117 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 OR5T1Q8NG75 326 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 OR52L2PQ8NGH6 319 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 OR51A2Q8NGJ7 313 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 GRPEL2Q8TAA5 225 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 DYNLRB2Q8TF09 96 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 CANT1Q8WVQ1 401 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 ZC4H2Q9NQZ6 224 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 IL36GQ9NZH8 169 aa7.21□□□□□ -1.25
SCFD1-215ENST00000555259 METTL1Q9UBP6 276 aaKnown RBP7.21□□□□□ -1.25
SCFD1-215ENST00000555259 GSTP1P09211 210 aaKnown RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 AADACP22760 399 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 PPP1CCP36873 323 aaKnown RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 TRAT1Q6PIZ9 186 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SLC16A13Q7RTY0 426 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 KCTD20Q7Z5Y7 419 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 ARHGAP24Q8N264 748 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 GAPTQ8N292 157 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 BVESQ8NE79 360 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 MRPS24Q96EL2 167 aaKnown RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 WDR89Q96FK6 387 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 PARP12Q9H0J9 701 aaKnown RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 METTL9Q9H1A3 318 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 TAF9BQ9HBM6 251 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 JPT1Q9UK76 154 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 ING4Q9UNL4 249 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 OR5H14A6NHG9 310 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SLC22A1O15245 554 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SLC16A6O15403 523 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SNX3O60493 162 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 RAB3AP20336 220 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SERPINA2P20848 420 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms