RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ORM2P19652 201 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 S100A2P29034 98 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 DDTP30046 118 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 INPP1P49441 399 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 PSMB3P49720 205 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ZNF83P51522 516 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 RUNX1Q01196 453 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ATP5G2Q06055 141 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 PSG7Q13046 419 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 POU6F1Q14863 301 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 CDK10Q15131 360 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 MRPL2Q5T653 305 aaKnown RBP3.42□□□□□ -1.86
VRK1-203ENST00000555067 HES3Q5TGS1 186 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 TRIQKQ629K1 86 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 SLC36A1Q7Z2H8 476 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 UBL4BQ8N7F7 174 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 OR2T4Q8NH00 348 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ANKRD36BP1Q96IX9 119 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 FAM210BQ96KR6 192 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 CMSS1Q9BQ75 279 aaKnown RBP3.42□□□□□ -1.86
VRK1-203ENST00000555067 THTPAQ9BU02 230 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 MS4A8Q9BY19 250 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 HES4Q9HCC6 221 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ARMC1Q9NVT9 282 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 DOK5Q9P104 306 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ZNF222Q9UK12 451 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 HHLA2Q9UM44 414 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 NCOA1Q15788 1441 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 GRIN2BQ13224 1484 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 NAV1Q8NEY1 1877 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 ARAP3Q8WWN8 1544 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 F5H5P2 479 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 CTLA4P16410 223 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 MSNP26038 577 aaKnown RBP3.41□□□□□ -1.86
VRK1-203ENST00000555067 OR1E2P47887 323 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 CRYBA4P53673 196 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 ELF3P78545 371 aaPredicted RBP3.41□□□□□ -1.86
VRK1-203ENST00000555067 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 ALX1Q15699 326 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 MPPED2Q15777 294 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 BATFQ16520 125 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 C1orf194Q5T5A4 169 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 FAM78BQ5VT40 261 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 SLC35F6Q8N357 371 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 OR2D3Q8NGH3 330 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 OR4X1Q8NH49 305 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 JOSD2Q8TAC2 188 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 SFRP2Q96HF1 295 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 REEP6Q96HR9 211 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 BTF3L4Q96K17 158 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 SLC35G5Q96KT7 338 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 TRIM4Q9C037 500 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 EIF5A2Q9GZV4 153 aaKnown RBP3.41□□□□□ -1.86
VRK1-203ENST00000555067 GTSF1LQ9H1H1 148 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 C8orf4Q9NR00 106 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 TMEM38BQ9NVV0 291 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 IDI2-AS1Q9NZ38 188 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 FAM32AQ9Y421 112 aaKnown RBP3.41□□□□□ -1.86
VRK1-203ENST00000555067 TNS2Q63HR2 1409 aa3.41□□□□□ -1.86
VRK1-203ENST00000555067 MYO5BQ9ULV0 1848 aa3.4□□□□□ -1.86
VRK1-203ENST00000555067 PQLC2LA1A4F0 135 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 FAM159BA6NKW6 160 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 B4DEV8 164 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 C4orf51C9J302 202 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 MRASO14807 208 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 RGS5O15539 181 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 PIK3C2GO75747 1445 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 CXorf1O96002 111 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 CYBAP13498 195 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 KCNE1P15382 129 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 CBR1P16152 277 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 ZNF823P16415 610 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 CCL1P22362 96 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 TGFBR1P36897 503 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 HSPA9P38646 679 aaKnown RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 GABARAPL2P60520 117 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 PSME3P61289 254 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 FAM201AQ5SY85 155 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 FAM71E1Q6IPT2 247 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 HIST2H3AQ71DI3 136 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 DPPA2Q7Z7J5 298 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 LINC01551Q86U37 167 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 ZBTB8OSQ8IWT0 167 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 DEFB125Q8N687 156 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 OR51H1Q8NH63 302 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 GALMQ96C23 342 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 RBMXL1Q96E39 390 aaKnown RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 CPNE2Q96FN4 548 aaPredicted RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 DCUN1D1Q96GG9 259 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 NARS2Q96I59 477 aaKnown RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 PPP1R2P1Q96PQ5 205 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 MARVELD1Q9BSK0 173 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 NMNAT1Q9HAN9 279 aaPredicted RBP3.4□□□□□ -1.87
VRK1-203ENST00000555067 ENY2Q9NPA8 101 aa3.4□□□□□ -1.87
VRK1-203ENST00000555067 TAS2R1Q9NYW7 299 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms