RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 A0A1W2PQD3 144 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 B4E171 279 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 DTYMKP23919 212 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 NTF4P34130 210 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 ADMP35318 185 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 TSPAN7P41732 249 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 CEBPDP49716 269 aaPredicted RBP7.59□□□□□ -1.2
SYNE2-217ENST00000555022 PSMB3P49720 205 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.2
SYNE2-217ENST00000555022 ERVFC1-1P60608 527 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 YPEL5P62699 121 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 FAM189A2Q15884 450 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 SGMS2Q8NHU3 365 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 OR6C1Q96RD1 312 aa7.59□□□□□ -1.2
SYNE2-217ENST00000555022 LOC400499M0QZD8 3231 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF732B4DXR9 585 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 PGLYRP1O75594 196 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 VDAC1P21796 283 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 FBXO46Q6PJ61 603 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 DBX2Q6ZNG2 339 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 POLEQ07864 2286 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 A0A1B0GX78 115 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 SH2D1BO14796 132 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 RRP8O43159 456 aaKnown RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CDS2O95674 445 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 HRASP01112 189 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 RBM11P57052 281 aaKnown RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 ZP4Q12836 540 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CNN3Q15417 329 aaKnown RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CEACAM16Q2WEN9 425 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 HES3Q5TGS1 186 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF525Q8N782 197 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 OR10G4Q8NGN3 311 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 OR10G9Q8NGN4 311 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 OR10G7Q8NGN6 311 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 OR6X1Q8NH79 312 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CISD1Q9NZ45 108 aaKnown RBP7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CPAMD8Q8IZJ3 1885 aa7.58□□□□□ -1.2
SYNE2-217ENST00000555022 CBY3A6NI87 242 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 DEFB108AA8MXU0 73 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 SYNGR2O43760 224 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 SERF1AO75920 110 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 IFNA1P01562 189 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 CCL3P10147 92 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 G6PCP35575 357 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 Q6ZWC4 215 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 ANKRD37Q7Z713 158 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 H1FOOQ8IZA3 346 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 OR2V1Q8NHB1 315 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 RNASE8Q8TDE3 154 aaKnown RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 SSC4DQ8WTU2 575 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TRBV24-1A0A075B6N3 115 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 IGHV3-43A0A0B4J1X8 118 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 CXCL13O43927 109 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 IGHV3-43DP0DP04 118 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 OTX1P32242 354 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 ECI1P42126 302 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TNFRSF4P43489 277 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 IER3P46695 156 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 FOXG1P55316 489 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TCTAP57738 103 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 IL24Q13007 206 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TRIM61Q5EBN2 209 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 UNQ5815/PRO19632Q6UWF5 114 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TPRX1Q8N7U7 411 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 TXN2Q99757 166 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 NUDT16L1Q9BRJ7 211 aaKnown RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 VAMP8Q9BV40 100 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 SRXN1Q9BYN0 137 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 OR2J1Q9GZK6 312 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 CBY1Q9Y3M2 126 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 MTCH2Q9Y6C9 303 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 C11orf94C9JXX5 98 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 RND2P52198 227 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 PPP1CBP62140 327 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 SHHQ15465 462 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 NMSQ5H8A3 153 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 CXorf67Q86X51 503 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 GBGT1Q8N5D6 347 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 OR1L6Q8NGR2 347 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 OR1F12Q8NHA8 337 aa7.57□□□□□ -1.2
SYNE2-217ENST00000555022 ACTR3CQ9C0K3 210 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 PTRH2Q9Y3E5 179 aaKnown RBP7.57□□□□□ -1.2
SYNE2-217ENST00000555022 A0A0G2JMM0 328 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 A0A0J9YW62 118 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 A0A1W2PPB8 328 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 A0A1W2PRS3 328 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 KIR3DP1A8MWS1 328 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 H0Y8G0 127 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 GCGP01275 180 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 IGHEP01854 428 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 CCL1P22362 96 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 CA6P23280 308 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 NPPCP23582 126 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 CHRNB4P30926 498 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms