RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 ARHGAP21Q5T5U3 1957 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 TNRC6BQ9UPQ9 1833 aaKnown RBP14.06□□□□□ -0.16
XRCC3-209ENST00000554913 IGKV3D-15A0A087WSY6 115 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 HMGB3O15347 200 aaKnown RBP14.06□□□□□ -0.16
XRCC3-209ENST00000554913 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 OPN1MWP04001 364 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 OPN1MW2P0DN77 364 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 OPN1MW3P0DN78 364 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 CYB561P49447 251 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 SERF2P84101 59 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 TMEM41BQ5BJD5 291 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 OR4X1Q8NH49 305 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 POM121L2Q96KW2 1035 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 LINC00470Q9BZP3 86 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 CDH20Q9HBT6 801 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 KCNS2Q9ULS6 477 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 RBM7Q9Y580 266 aaKnown RBP14.06□□□□□ -0.16
XRCC3-209ENST00000554913 DNAJC13O75165 2243 aa14.06□□□□□ -0.16
XRCC3-209ENST00000554913 UBE2L5PA0A1B0GUS4 154 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 ZNF737O75373 536 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 HBG1P69891 147 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 HBG2P69892 147 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 ADIRFQ15847 76 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 MED12LQ86YW9 2145 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
XRCC3-209ENST00000554913 DEGS1O15121 323 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 WDR1O75083 606 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 CD81P60033 236 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 LINC00596Q86U02 117 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 RPP25LQ8N5L8 163 aaKnown RBP14.05□□□□□ -0.16
XRCC3-209ENST00000554913 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 LHX4Q969G2 390 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 SMIM7Q9BQ49 75 aa14.05□□□□□ -0.16
XRCC3-209ENST00000554913 ANKRD30BLA7E2S9 258 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 PATE3B3GLJ2 98 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 TGOLN2O43493 480 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 IL2RGP31785 369 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 OR8G2PQ6IF36 304 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 ZNF573Q86YE8 665 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 OR10A7Q8NGE5 316 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
XRCC3-209ENST00000554913 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
XRCC3-209ENST00000554913 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 A0A1W2PR80 420 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 COX5BP10606 129 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 CA6P23280 308 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 GNG3P63215 75 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 PMS2CLQ68D20 193 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 Q6P435 159 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 C16orf82Q7Z2V1 217 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 MEGF10Q96KG7 1140 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 CTDSP1Q9GZU7 261 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 SLC39A9Q9NUM3 307 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 PITPNC1Q9UKF7 332 aa14.04□□□□□ -0.16
XRCC3-209ENST00000554913 SMCO3A2RU48 225 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 SIRPB1O00241 398 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 WNT2P09544 360 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 WNT5AP41221 380 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 LHX2P50458 406 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 NCR3LG1Q68D85 454 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 RPUSD4Q96CM3 377 aaKnown RBP14.03□□□□□ -0.16
XRCC3-209ENST00000554913 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 UFSP2Q9NUQ7 469 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 GAB2Q9UQC2 676 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 AHCTF1Q8WYP5 2266 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 IFNA1P01562 189 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 PFN1P07737 140 aaKnown RBP14.03□□□□□ -0.16
XRCC3-209ENST00000554913 DDTP30046 118 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 PKIAP61925 76 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 SLC38A11Q08AI6 406 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 TRA2AQ13595 282 aaKnown RBP eCLIP14.03□□□□□ -0.16
XRCC3-209ENST00000554913 ACSF3Q4G176 576 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-209ENST00000554913 SPATA46Q5T0L3 261 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 PINX1Q96BK5 328 aaKnown RBP14.03□□□□□ -0.16
XRCC3-209ENST00000554913 HES7Q9BYE0 225 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 SMOC1Q9H4F8 434 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 NAT8Q9UHE5 227 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 PRSS50Q9UI38 385 aa14.03□□□□□ -0.16
XRCC3-209ENST00000554913 NPIPB11E5RHQ5 1161 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 TUBG1P23258 451 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 CLDN18P56856 261 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 COL10A1Q03692 680 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 CLEC12BQ2HXU8 276 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 DEFB123Q8N688 67 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 OR51I2Q9H344 312 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 TRAPPC2LQ9UL33 140 aa14.02□□□□□ -0.16
XRCC3-209ENST00000554913 PCSK5Q92824 1860 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 A0A1B0GV90 55 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 OR5B21A6NL26 309 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 GZMHP20718 246 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 ERVS71-1P61550 626 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 MEF2BQ02080 365 aaPredicted RBP14.02□□□□□ -0.17
XRCC3-209ENST00000554913 TMEM241Q24JQ0 296 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 DNLZQ5SXM8 178 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 ACSM6Q6P461 480 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 CYP2G1PQ6ZSU1 146 aa14.02□□□□□ -0.17
XRCC3-209ENST00000554913 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.02□□□□□ -0.17
XRCC3-209ENST00000554913 FGFRL1Q8N441 504 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 447.9 ms