RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GNMTQ14749 295 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 HLA-DRB5Q30154 266 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 RNASE12Q5GAN4 147 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OVCH2Q7RTZ1 564 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OR2AK2Q8NG84 335 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OR10V1Q8NGI7 309 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OR5H2Q8NGV7 314 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 WDR12Q9GZL7 423 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 OR5H8P0DN80 308 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 HTR1DP28221 377 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 AP3S2P59780 193 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 DYRK1AQ13627 763 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 VAX1Q5SQQ9 334 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 H1FOOQ8IZA3 346 aaPredicted RBP13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 LEAP2Q969E1 77 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 TRIM63Q969Q1 353 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 MS4A7Q9GZW8 240 aaPredicted RBP13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 RDH8Q9NYR8 311 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF69Q9UC07 566 aa13.37□□□□□ -0.27
SPTLC2-203ENST00000554901 ANKRD20A5PA0PJZ0 165 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 FAM172BPA6NC97 362 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CD74P04233 296 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 FCER2P06734 321 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 HLA-DMAP28067 261 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CD40LGP29965 261 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 HRH1P35367 487 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 SAA4P35542 130 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CEACAM3P40198 252 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 GNG10P50151 68 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF137PP52743 207 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 PRB3Q04118 309 aaPredicted RBP13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF846Q147U1 533 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 PDZD9Q8IXQ8 264 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 OR10X1Q8NGY0 326 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 GIMAP1Q8WWP7 306 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 ABHD14AQ9BUJ0 271 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 CCDC32Q9BV29 185 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 DPM3Q9P2X0 92 aa13.36□□□□□ -0.27
SPTLC2-203ENST00000554901 LEUTXA8MZ59 168 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 OOSP1A8MZH6 123 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 BUB1B-PAK6H3BSN5 160 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 TUSC2O75896 110 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 SRD5A1P18405 259 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 IL3RAP26951 378 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF134P52741 427 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 PPP5CP53041 499 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 MEF2DQ14814 521 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 UTF1Q5T230 341 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 STEAP1BQ6NZ63 245 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 DHRS11Q6UWP2 260 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 Q71RC1 249 aaPredicted RBP13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 ARRDC1Q8N5I2 433 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 MALSU1Q96EH3 234 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 EHFQ9NZC4 300 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 OR2W1Q9Y3N9 320 aa13.35□□□□□ -0.27
SPTLC2-203ENST00000554901 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 CRLF1O75462 422 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 IGHV3-7P01780 117 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 PMP2P02689 132 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 CD3DP04234 171 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 AKAIN1P0CW23 69 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 EPHA1P21709 976 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 LSAMPQ13449 338 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 FAM53AQ6NSI3 398 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 IL17RELQ6ZVW7 336 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 TMEM17Q86X19 198 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 SDHCQ99643 169 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 AGMATQ9BSE5 352 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 C11orf54Q9H0W9 315 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 PIPOXQ9P0Z9 390 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 LANCL1O43813 399 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 SLC22A5O76082 557 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 RAB3DO95716 219 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 IFNA6P05013 189 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 FCGR2CP31995 323 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 RFX2P48378 723 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 TUSC1Q2TAM9 212 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 RUSC1-AS1Q66K80 236 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF660Q6AZW8 331 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 FAM71F2Q6NXP2 309 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 OR6F1Q8NGZ6 308 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 IFI27L2Q9H2X8 130 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 GAB2Q9UQC2 676 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 FAM96BQ9Y3D0 163 aa13.34□□□□□ -0.27
SPTLC2-203ENST00000554901 A0A1W2PRD5 423 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 A0A1W2PRF3 423 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 A0A1W2PRM7 423 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 LY6LH3BQJ8 138 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 RAB29O14966 203 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 SLC31A2O15432 143 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms