RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CEACAM18A8MTB9 384 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 TIMM8AO60220 97 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 LYL1P12980 280 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 G0S2P27469 103 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 NHLH1Q02575 133 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 ZNF616Q08AN1 781 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 ZNF343Q6P1L6 599 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 IGHV2OR16-5A0A0B4J2B6 119 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 CEACAM6P40199 344 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 FAM27E3Q08E93 113 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 C1orf185Q5T7R7 199 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 RNASE11Q8TAA1 199 aaKnown RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 AQP10Q96PS8 301 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 DNAJB11Q9UBS4 358 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 COL12A1Q99715 3063 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 OR5H1A6NKK0 313 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 A8MWP6 167 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 PROB1E7EW31 1015 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 EREGO14944 169 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 RRP8O43159 456 aaKnown RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 NXPH2O95156 264 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 NXPH3O95157 252 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 FHITP49789 147 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 TMEM268Q5VZI3 342 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 MEX3BQ6ZN04 569 aaKnown RBP9.89□□□□□ -0.83
SHMT2-212ENST00000554467 Q8NFD4 153 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 GALNT14Q96FL9 552 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
SHMT2-212ENST00000554467 TACC2O95359 2948 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 J3QT63 122 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 DEGS1O15121 323 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 IFNA10P01566 189 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 RAC2P15153 192 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 TMEM211Q6ICI0 200 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 Q6ZR03 302 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 SAXO1Q8IYX7 474 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-212ENST00000554467 UMAD1C9J7I0 102 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 K7EPK0 472 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 OR2C1O95371 312 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 CRYABP02511 175 aaKnown RBP9.88□□□□□ -0.83
SHMT2-212ENST00000554467 OR5AC1P0C628 307 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 IL24Q13007 206 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 SGPP2Q8IWX5 399 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 FAM71E2Q8N5Q1 922 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 Q8NA96 180 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
SHMT2-212ENST00000554467 MUCL1Q96DR8 90 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 C2orf50Q96LR7 162 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 TNFSF12O43508 249 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 PCP4P48539 62 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 CEBPGP53567 150 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 HERV-K104P61576 105 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 TBR1Q16650 682 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 GUK1Q16774 197 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 MIDNQ504T8 468 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 SPIN3Q5JUX0 258 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 RTN4IP1Q8WWV3 396 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-212ENST00000554467 Q9N2K0 584 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 SLC2A9Q9NRM0 540 aa9.88□□□□□ -0.83
SHMT2-212ENST00000554467 CNOT4O95628 575 aaKnown RBP9.87□□□□□ -0.83
SHMT2-212ENST00000554467 NAPSAO96009 420 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 PPYP01298 95 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 IFNA21P01568 189 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 FABP4P15090 132 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 HMGN3Q15651 99 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 PRSS54Q6PEW0 395 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 Q8WTZ3 238 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 RAB18Q9NP72 206 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 SLC25A15Q9Y619 301 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 POMT1Q9Y6A1 747 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 DCHS2Q6V1P9 2916 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 IGKV1D-13A0A0B4J2D9 117 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 IQCF6A8MYZ5 107 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 OR2H2O95918 312 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 PRH1P02810 166 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 CTSDP07339 412 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-212ENST00000554467 IGKV1-13P0DP09 117 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 PLPPR1Q8TBJ4 325 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 MRPL30Q8TCC3 161 aaKnown RBP9.87□□□□□ -0.83
SHMT2-212ENST00000554467 SYT3Q9BQG1 590 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 MEMO1Q9Y316 297 aa9.87□□□□□ -0.83
SHMT2-212ENST00000554467 LRP5LA4QPB2 252 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 TSTD3H0UI37 97 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 PET100P0DJ07 73 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 RPL12P30050 165 aaKnown RBP9.86□□□□□ -0.83
SHMT2-212ENST00000554467 IL2RGP31785 369 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 P2RY6Q15077 328 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 RHEBQ15382 184 aa9.86□□□□□ -0.83
SHMT2-212ENST00000554467 USF2Q15853 346 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms