RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C16orf82Q7Z2V1 217 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CROCCP3Q8IVE0 287 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 OR2C3Q8N628 320 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 C17orf50Q8WW18 174 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 IL1F10Q8WWZ1 152 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 LEAP2Q969E1 77 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 PTX4Q96A99 478 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 GFI1Q99684 422 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 SULT4A1Q9BR01 284 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 NICN1Q9BSH3 213 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 ATG5Q9H1Y0 275 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 OR51E2Q9H255 320 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 KCNK15Q9H427 330 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 RANBP3Q9H6Z4 567 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-209ENST00000553855 C12orf4Q9NQ89 552 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 ZNF581Q9P0T4 197 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 DAPK2Q9UIK4 370 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 JPT1Q9UK76 154 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 HSF4Q9ULV5 492 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 PSG11Q9UQ72 335 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 TCF19Q9Y242 345 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 MMP24Q9Y5R2 645 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 MXRA5Q9NR99 2828 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 A0A075B6Q4 140 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 IGHV3-43A0A0B4J1X8 118 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 TMEM272A0A1B0GTI8 110 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 SMIM30A4D0T7 59 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 M0QZK8 103 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 SOCS1O15524 211 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 TXNL1O43396 289 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-209ENST00000553855 MDKP21741 143 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-209ENST00000553855 PAX6P26367 422 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 CFPP27918 469 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 RAB13P51153 203 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 QRFPP83859 136 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 ARFRP1Q13795 201 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 HES1Q14469 280 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 SIGIRRQ6IA17 410 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 SFXN4Q6P4A7 337 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 BAIAP2L2Q6UXY1 529 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 MOB3BQ86TA1 216 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 OR8H3Q8N146 312 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 FAM89BQ8N5H3 189 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 C8orf31Q8N9H6 132 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 OR10V1Q8NGI7 309 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 OR10R2Q8NGX6 335 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 OR1L1Q8NH94 360 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 UBALD1Q8TB05 177 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
PSEN1-209ENST00000553855 ARHGAP5-AS1Q96IT6 56 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 ZNF747Q9BV97 191 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 PECRQ9BY49 303 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 PRSS22Q9GZN4 317 aa6.72□□□□□ -1.33
PSEN1-209ENST00000553855 COL6A5A8TX70 2615 aa6.71□□□□□ -1.33
PSEN1-209ENST00000553855 A0A1W2PPE3 182 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 SERPINE3A8MV23 424 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 C15orf65H3BRN8 121 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 HSD17B6O14756 317 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 TSPAN9O75954 239 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 SLC2A2P11168 524 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-209ENST00000553855 SDC2P34741 201 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 KIR2DS4P43632 304 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 HTD2P86397 168 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 KIR2DS1Q14954 304 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 IDNKQ5T6J7 187 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 Q6ZSV7 163 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 TMEM219Q86XT9 240 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 TGIF2LXQ8IUE1 241 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 GAPTQ8N292 157 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 LINC00311Q8N616 119 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 OR2AK2Q8NG84 335 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 C16orf95Q9H693 158 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 AK3Q9UIJ7 227 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 ETV7Q9Y603 341 aa6.71□□□□□ -1.34
PSEN1-209ENST00000553855 FBN1P35555 2871 aaKnown RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 A0A0A6YYD4 124 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 TRBV6-6A0A0A6YYG2 114 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 A6NDX4 124 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 TIMM23O14925 209 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 YPEL1O60688 119 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 NAPSAO96009 420 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 TMEM11P17152 192 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 JUNBP17275 347 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 ZBTB25P24278 435 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 SERPINB10P48595 397 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 LSM3P62310 102 aaKnown RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 HLA-DRB3P79483 266 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 PITPNAQ00169 270 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 HMGN3Q15651 99 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 MORN2Q502X0 79 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 C19orf54Q5BKX5 351 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 SLC25A48Q6ZT89 311 aaKnown RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 LYG1Q8N1E2 194 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms