RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZSCAN16Q9H4T2 348 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 RPP21Q9H633 154 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 MRPL40Q9NQ50 206 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 MARCOQ9UEW3 520 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CLEC2DQ9UHP7 191 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 MRM2Q9UI43 246 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ANXA10Q9UJ72 324 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF257Q9Y2Q1 563 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ACOT9Q9Y305 439 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ESPL1Q14674 2120 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 NAV3Q8IVL0 2385 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF106Q9H2Y7 1883 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 NYNRINQ9P2P1 1898 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 HIVEP3Q5T1R4 2406 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SPG11Q96JI7 2443 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CCDC168Q8NDH2 2452 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 MAP1AP78559 2803 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SVILO95425 2214 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TRAV40A0A0B4J280 105 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0G2JMP0 313 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0X1KG70 313 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 KIR2DS1A0A191URI9 304 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SLC5A10A0PJK1 596 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 ARGFXA6NJG6 315 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 OR5H1A6NKK0 313 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 IQCF5A8MTL0 148 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 KRBOX1C9JBD0 128 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 UPK2O00526 184 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 NDUFS5O43920 106 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PLIN3O60664 434 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 YIF1AO95070 293 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TNFP01375 233 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CDK1P06493 297 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CD99P14209 185 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CELP19835 753 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CXCR1P25024 350 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 LOXP28300 417 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 KDELR2P33947 212 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 HTR2BP41595 481 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TTPAP49638 278 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 RAB38P57729 211 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PPP1CAP62136 330 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SKP1P63208 163 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PMS2P3Q13401 168 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TTMPQ5BVD1 217 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF470Q6ECI4 717 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 C22orf39Q6P5X5 142 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CLEC19AQ6UXS0 136 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TAC4Q86UU9 113 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 LRP11Q86VZ4 500 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PLCZ1Q86YW0 608 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 C10orf107Q8IVU9 208 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SELENOHQ8IZQ5 122 aaKnown RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 NECAP1Q8NC96 275 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CCDC112Q8NEF3 446 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 FDCSPQ8NFU4 85 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 TTLQ8NG68 377 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 OR4K17Q8NGC6 315 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 OR4K5Q8NGD3 323 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 OR52P1PQ8NH57 321 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CT55Q8WUE5 264 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PATE1Q8WXA2 126 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 LRRC58Q96CX6 371 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 ZMYND19Q96E35 227 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PITX2Q99697 317 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 RBBP8Q99708 897 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF251Q9BRH9 671 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 C7orf50Q9BRJ6 194 aaKnown RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 LLPHQ9BRT6 129 aaKnown RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 NUDT9Q9BW91 350 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SRRQ9GZT4 340 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF430Q9H8G1 570 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PLEKHA1Q9HB21 404 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 CISHQ9NSE2 258 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 RBM22Q9NW64 420 aaKnown RBP eCLIP1.93□□□□□ -2.16e-8■■□□□ 13.5
SCFD1-210ENST00000553693 DMAC2Q9NW81 257 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 PRO0628Q9UI54 55 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 HS3ST2Q9Y278 367 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 SIGLEC7Q9Y286 467 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 LRRC42Q9Y546 428 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 USH1CQ9Y6N9 552 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 URGCP-MRPS24S4R325 110 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 UNC13CQ8NB66 2214 aa1.93□□□□□ -2.1
SCFD1-210ENST00000553693 RP1L1Q8IWN7 2480 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 NBEAL1Q6ZS30 2694 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0D9SEW6 157 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 C9JQL5 133 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 F5H5T6 163 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 C19orf84I3L1E1 186 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PLPP3O14495 311 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 BPY2O14599 106 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 TOR1AO14656 332 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RBFOX2O43251 390 aaKnown RBP eCLIP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ENTPD6O75354 484 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SERPINB7O75635 380 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CDK14O94921 469 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 IGLV3-25P01717 112 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms