RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	TRAT1	Q6PIZ9	186 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	ZGRF1	Q86YA3	2104 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	TMEM252	Q8N6L7	170 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	ITLN1	Q8WWA0	313 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	SNX22	Q96L94	193 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	RNF150	Q9ULK6	438 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	MSRB2	Q9Y3D2	182 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	RNF115	Q9Y4L5	304 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	ACACA	Q13085	2346 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	WRB	O00258	174 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	TMEM50A	O95807	157 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	IGKV1-5	P01602	117 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	SPP1	P10451	314 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	MSMO1	Q15800	293 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	BTNL8	Q6UX41	500 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199		Q6ZRM9	215 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	RNASE11	Q8TAA1	199 aa	Known RBP	11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	NINJ1	Q92982	152 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	SNRNP40	Q96DI7	357 aa	Known RBP	11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	OR2D2	Q9H210	308 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	HRH4	Q9H3N8	390 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	PARP11	Q9NR21	331 aa		11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.72	□□□□□ -0.53
RAB3IP-216	ENST00000552199	IGHV3OR15-7	A0A075B7D8	119 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	TMEM218	A2RU14	115 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199		B8ZZF3	427 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	C15orf65	H3BRN8	121 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	NXPH3	O95157	252 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	APOC3	P02656	99 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	SSTR5	P35346	364 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	PPP1CC	P36873	323 aa	Known RBP	11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	GATA4	P43694	442 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	PAX9	P55771	341 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	IZUMO4	Q1ZYL8	232 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	FAM209A	Q5JX71	171 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	ODF3L1	Q8IXM7	274 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	NARS2	Q96I59	477 aa	Known RBP	11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	JKAMP	Q9P055	326 aa		11.71	□□□□□ -0.53
RAB3IP-216	ENST00000552199	MGST3	O14880	152 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SPINT2	O43291	252 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ASCL1	P50553	236 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	HTD2	P86397	168 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	EDDM3A	Q14507	147 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	TMEM108	Q6UXF1	575 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	NUP37	Q8NFH4	326 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	PPP1R35	Q8TAP8	253 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	C5orf30	Q96GV9	206 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	DCTN5	Q9BTE1	182 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	CACNG5	Q9UF02	275 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SH3BGRL2	Q9UJC5	107 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	CACNA1D	Q01668	2161 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ABCD4	O14678	606 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SIGLEC5	O15389	551 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ADH4	P08319	380 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	DANCR	P0C864	163 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	GZMH	P20718	246 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	OMG	P23515	440 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	AKR1C2	P52895	323 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SRSF3	P84103	164 aa	Known RBP	11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	BAX	Q07812	192 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SWI5	Q1ZZU3	235 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	CR1L	Q2VPA4	569 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	PRR30	Q53SZ7	412 aa	Predicted RBP	11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199		Q6ZRG5	221 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	RFESD	Q8TAC1	157 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	COQ3	Q9NZJ6	369 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	IL19	Q9UHD0	177 aa		11.7	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ODAM	A1E959	279 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199		K7N7A8	449 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	IGHV1-46	P01743	117 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	PTAFR	P25105	342 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	DYNLT3	P51808	116 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	RPL30	P62888	115 aa	Known RBP	11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	TNFAIP6	P98066	277 aa	Predicted RBP	11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	NHLH1	Q02575	133 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	AKR1C1	Q04828	323 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ZNF266	Q14584	549 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	CLINT1	Q14677	625 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	WFDC8	Q8IUA0	241 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ZNF295-AS1	Q8N0V1	137 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	HSD17B11	Q8NBQ5	300 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	LYPD6B	Q8NI32	183 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	FAM222B	Q8WU58	562 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	RAB40C	Q96S21	281 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	ESRP2	Q9H6T0	727 aa	Known RBP	11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SPTBN4	Q9H254	2564 aa		11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.69	□□□□□ -0.54
RAB3IP-216	ENST00000552199	IGHV3-43	A0A0B4J1X8	118 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	IGHV3-43D	P0DP04	118 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	F2RL1	P55085	397 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	RPL23A	P62750	156 aa	Known RBP	11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	FGFRL1	Q8N441	504 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	OR5C1	Q8NGR4	320 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	SH3BGRL3	Q9H299	93 aa		11.68	□□□□□ -0.54
RAB3IP-216	ENST00000552199	GCM1	Q9NP62	436 aa		11.68	□□□□□ -0.54

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