RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 LIN7CQ9NUP9 197 aaKnown RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 GNG12Q9UBI6 72 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 GMPPBQ9Y5P6 360 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 SMAD5-AS1Q9Y6J3 95 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 IGHV7-81A0A0B4J1V7 117 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 C3orf84H3BNL1 204 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 MPZL2O60487 215 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 RAMP3O60896 148 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 PPIFP30405 207 aaKnown RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ZNF93P35789 620 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 RAB9AP51151 201 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 GBX2P52951 348 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ACTBP60709 375 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 SNRPGP62308 76 aaKnown RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ZNF616Q08AN1 781 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 FHL3Q13643 280 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 IL13RA2Q14627 380 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 RPL39P5Q59GN2 51 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 SIGIRRQ6IA17 410 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 RAB12Q6IQ22 244 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 TMEM65Q6PI78 240 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ASCL4Q6XD76 172 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ZNF497Q6ZNH5 498 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 SLC25A48Q6ZT89 311 aaKnown RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 KCTD20Q7Z5Y7 419 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ODF3L1Q8IXM7 274 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 IZUMO1Q8IYV9 350 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 DRAXINQ8NBI3 349 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 CCDC54Q8NEL0 328 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 PXT1Q8NFP0 134 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ABHD5Q8WTS1 349 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 TMEM106AQ96A25 262 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ZNF184Q99676 751 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 FAM110AQ9BQ89 295 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 GPR61Q9BZJ8 451 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 METTL9Q9H1A3 318 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 FBXL15Q9H469 300 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 PCDHB16Q9NRJ7 776 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 ETAA1Q9NY74 926 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 TRAPPC2LQ9UL33 140 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 PEX16Q9Y5Y5 336 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
PRPF40B-214ENST00000551320 TRAV41A0A0B4J266 112 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 LCE6AA0A183 80 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 A0A1W2PN81 502 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 TMEM212A6NML5 194 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 OVOL1O14753 267 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 MAGEB3O15480 346 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 WBP4O75554 376 aaKnown RBP5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 CSTBP04080 98 aaKnown RBP5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 MAS1P04201 325 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 ELANEP08246 267 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 APELAP0DMC3 54 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 GP9P14770 177 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 GZMHP20718 246 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 CD1BP29016 333 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 CHRNA7P36544 502 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 GLIPR1L1Q6UWM5 242 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 FAM131AQ6UXB0 335 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 JAGN1Q8N5M9 183 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 COMMD1Q8N668 190 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 RNF152Q8N8N0 203 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 RHOXF1Q8NHV9 184 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 MYOZ3Q8TDC0 251 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 HDHD3Q9BSH5 251 aaPredicted RBP5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 SELENOIQ9C0D9 397 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 OR51J1Q9H342 316 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 TAF9BQ9HBM6 251 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 PALMDQ9NP74 551 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 OR2S2Q9NQN1 319 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 RNF150Q9ULK6 438 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 VSIG4Q9Y279 399 aa5.26□□□□□ -1.57
PRPF40B-214ENST00000551320 SAA2-SAA4A0A096LPE2 208 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 IZUMO1RA6ND01 250 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 RRP9O43818 475 aaKnown RBP5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 CRTAPO75718 401 aaPredicted RBP5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 TRBV12-3P01733 135 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 SAA2P0DJI9 122 aaPredicted RBP5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 EDN2P20800 178 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 CHATP28329 748 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 BDKRB2P30411 391 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 RPS11P62280 158 aaKnown RBP eCLIP5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 CX3CL1P78423 397 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 TMED1Q13445 227 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 MORN2Q502X0 79 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 CT83Q5H943 113 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 FAM27D1Q5T7N8 215 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 LINC00311Q8N616 119 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 Q8NFD4 153 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 NUDT10Q8NFP7 164 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 OR5T1Q8NG75 326 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 MRPL30Q8TCC3 161 aaKnown RBP5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 IL1F10Q8WWZ1 152 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 GHSRQ92847 366 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 NUDT11Q96G61 164 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 ABHD14BQ96IU4 210 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 OR14A2Q96R54 314 aa5.25□□□□□ -1.57
PRPF40B-214ENST00000551320 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms