RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	DPCD	Q9BVM2	203 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TM2D1	Q9BX74	207 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	CHST6	Q9GZX3	395 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	HEXA-AS1	Q9H8Q6	139 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	PLGRKT	Q9HBL7	147 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TXNL4B	Q9NX01	149 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR6C3	Q9NZP0	311 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	ONECUT1	Q9UBC0	465 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	AK6	Q9Y3D8	172 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MXRA5	Q9NR99	2828 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	C2CD3	Q4AC94	2353 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	JMJD1C	Q15652	2540 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TRGV10	A0A0A0MS01	117 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TRAV40	A0A0B4J280	105 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	IGHV1-69D	A0A0B4J2H0	117 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	ODAM	A1E959	279 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RAB19	A4D1S5	217 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MFSD2B	A6NFX1	497 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MCRIP1	C9JLW8	97 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RNASEK-C17orf49	H0YIS7	233 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	CLDN34	H7C241	214 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	LDLRAD4	O15165	306 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TCF21	O43680	179 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	IGHV1-69	P01742	117 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	CGB3	P0DN86	165 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	CGB7	P0DN87	165 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RAB3B	P20337	219 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	GZMH	P20718	246 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	FUT3	P21217	361 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	GLIPR1	P48060	266 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SNU13	P55769	128 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	UCP3	P55916	312 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	HILS1	P60008	231 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RAB4B	P61018	213 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RPS27A	P62979	156 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SCN1B	Q07699	218 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	AES	Q08117	197 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	UNC119	Q13432	240 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	EDDM3A	Q14507	147 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	ZNF273	Q14593	569 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RAB11B	Q15907	218 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MIDN	Q504T8	468 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	PAN3	Q58A45	887 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SLC35E4	Q6ICL7	350 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	HEPN1	Q6WQI6	88 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TCF23	Q7RTU1	214 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	VMO1	Q7Z5L0	202 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	FAM185A	Q8N0U4	392 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	BPIFB2	Q8N4F0	458 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SUMF2	Q8NBJ7	301 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MINDY2	Q8NBR6	621 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR11H6	Q8NGC7	330 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR10A7	Q8NGE5	316 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	ZNF418	Q8TF45	676 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	CAPSL	Q8WWF8	208 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	PTX4	Q96A99	478 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	FAM3D	Q96BQ1	224 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	YIPF6	Q96EC8	236 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	COQ2	Q96H96	371 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	URM1	Q9BTM9	101 aa	Known RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SUCNR1	Q9BXA5	334 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	TMEM59	Q9BXS4	323 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	SELENOI	Q9C0D9	397 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR51E2	Q9H255	320 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	PPA2	Q9H2U2	334 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	GAL3ST2	Q9H3Q3	398 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	PALMD	Q9NP74	551 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	STEAP1	Q9UHE8	339 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	HSF4	Q9ULV5	492 aa		3.81	□□□□□ -1.8
ATXN2-222	ENST00000550889	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	TMEM30CP	A0ZSE6	113 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	C5orf51	A6NDU8	294 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	ZNF729	A6NN14	1252 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	LINC00473	A8K010	186 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	NPIPB11	E5RHQ5	1161 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	ORC5	O43913	435 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	PDCD6	O75340	191 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	NDUFS6	O75380	124 aa	Known RBP	3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	CLPX	O76031	633 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	MT-ND4	P03905	459 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	SMIM18	P0DKX4	95 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	IGHV1-8	P0DP01	117 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	CCL3L1	P16619	93 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	RAB4A	P20338	218 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	GADD45A	P24522	165 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	CD34	P28906	385 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	SDC2	P34741	201 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR10A3	P58181	314 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	LOXL3	P58215	753 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	ATAD3C	Q5T2N8	411 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	OR52W1	Q6IF63	320 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	HCP5	Q6MZN7	132 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	RBMS3	Q6XE24	437 aa	Known RBP	3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	ZNF497	Q6ZNH5	498 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	SLC16A12	Q6ZSM3	486 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	NR2C2AP	Q86WQ0	139 aa		3.8	□□□□□ -1.8
ATXN2-222	ENST00000550889	CROCCP3	Q8IVE0	287 aa		3.8	□□□□□ -1.8

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