RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LYG1Q8N1E2 194 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 SAMD12Q8N8I0 201 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 YPEL2Q96QA6 119 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 ABHD14AQ9BUJ0 271 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 ST6GALNAC5Q9BVH7 336 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 PARP12Q9H0J9 701 aaKnown RBP11.03□□□□□ -0.64
TROAP-213ENST00000550709 RAB18Q9NP72 206 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 SPATA2Q9UM82 520 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 SIGLEC9Q9Y336 463 aa11.03□□□□□ -0.64
TROAP-213ENST00000550709 IGKV1-6A0A0C4DH72 117 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 BET1O15155 118 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 FABP7O15540 132 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 RAB7AP51149 207 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 GNG2P59768 71 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 HES1Q14469 280 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 HACD4Q5VWC8 232 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 OR8H3Q8N146 312 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 OR2AK2Q8NG84 335 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 RBMXL1Q96E39 390 aaKnown RBP11.02□□□□□ -0.65
TROAP-213ENST00000550709 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 DCSTAMPQ9H295 470 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 DIABLOQ9NR28 239 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.65
TROAP-213ENST00000550709 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 CLPSL1A2RUU4 121 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 HAX1O00165 279 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 TMEM127O75204 238 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 SNRNP70P08621 437 aaKnown RBP11.01□□□□□ -0.65
TROAP-213ENST00000550709 GSTP1P09211 210 aaKnown RBP11.01□□□□□ -0.65
TROAP-213ENST00000550709 GSTT2P0CG29 244 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 GSTT2BP0CG30 244 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 FAM106CPP0CH98 169 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 ZBTB25P24278 435 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 RPL5P46777 297 aaKnown RBP11.01□□□□□ -0.65
TROAP-213ENST00000550709 OR3A3P47888 321 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 ZNF816Q0VGE8 651 aaPredicted RBP11.01□□□□□ -0.65
TROAP-213ENST00000550709 ZNF260Q3ZCT1 412 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 TGIF2LXQ8IUE1 241 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
TROAP-213ENST00000550709 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.01□□□□□ -0.65
TROAP-213ENST00000550709 RNF150Q9ULK6 438 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
TROAP-213ENST00000550709 IGKV1D-8A0A087WSZ0 117 aa11□□□□□ -0.65
TROAP-213ENST00000550709 ZNF736B4DX44 427 aaPredicted RBP11□□□□□ -0.65
TROAP-213ENST00000550709 SSX5O60225 188 aa11□□□□□ -0.65
TROAP-213ENST00000550709 TSPAN9O75954 239 aa11□□□□□ -0.65
TROAP-213ENST00000550709 IGKV1D-33P01593 117 aa11□□□□□ -0.65
TROAP-213ENST00000550709 IGKV1-33P01594 117 aa11□□□□□ -0.65
TROAP-213ENST00000550709 FCER2P06734 321 aa11□□□□□ -0.65
TROAP-213ENST00000550709 PTHLHP12272 177 aa11□□□□□ -0.65
TROAP-213ENST00000550709 KIR2DS4P43632 304 aa11□□□□□ -0.65
TROAP-213ENST00000550709 RORCP51449 518 aa11□□□□□ -0.65
TROAP-213ENST00000550709 BLCAPP62952 87 aa11□□□□□ -0.65
TROAP-213ENST00000550709 KIR2DS1Q14954 304 aa11□□□□□ -0.65
TROAP-213ENST00000550709 HERPUD1Q15011 391 aa11□□□□□ -0.65
TROAP-213ENST00000550709 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
TROAP-213ENST00000550709 CFHR4Q92496 578 aa11□□□□□ -0.65
TROAP-213ENST00000550709 S100A16Q96FQ6 103 aaKnown RBP11□□□□□ -0.65
TROAP-213ENST00000550709 SLC25A33Q9BSK2 321 aa11□□□□□ -0.65
TROAP-213ENST00000550709 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
TROAP-213ENST00000550709 IFI27L2Q9H2X8 130 aa11□□□□□ -0.65
TROAP-213ENST00000550709 C16orf95Q9H693 158 aa11□□□□□ -0.65
TROAP-213ENST00000550709 SCOCQ9UIL1 159 aa11□□□□□ -0.65
TROAP-213ENST00000550709 MMP24Q9Y5R2 645 aa11□□□□□ -0.65
TROAP-213ENST00000550709 A0A1B0GUS0 222 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
TROAP-213ENST00000550709 FAM90A9PA6NNJ1 464 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 LPLP06858 475 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 TMEM11P17152 192 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 DTYMKP23919 212 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 ZNF137PP52743 207 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 PITPNAQ00169 270 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
TROAP-213ENST00000550709 HABP2Q14520 560 aaPredicted RBP10.99□□□□□ -0.65
TROAP-213ENST00000550709 SPCS2Q15005 226 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 PNLIPRP3Q17RR3 467 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 Q6ZS46 218 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 OR10J5Q8NHC4 309 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 KCTD12Q96CX2 325 aaKnown RBP10.99□□□□□ -0.65
TROAP-213ENST00000550709 ABHD14BQ96IU4 210 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 MRPL20Q9BYC9 149 aaKnown RBP10.99□□□□□ -0.65
TROAP-213ENST00000550709 ABCG5Q9H222 651 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 AUNIPQ9H7T9 357 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 RDH8Q9NYR8 311 aa10.99□□□□□ -0.65
TROAP-213ENST00000550709 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
TROAP-213ENST00000550709 A0A0A6YYH2 397 aa10.98□□□□□ -0.65
TROAP-213ENST00000550709 A6NJ64 397 aa10.98□□□□□ -0.65
TROAP-213ENST00000550709 XRCC3O43542 346 aa10.98□□□□□ -0.65
TROAP-213ENST00000550709 LANCL1O43813 399 aa10.98□□□□□ -0.65
TROAP-213ENST00000550709 OR2F2O95006 317 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms