RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 CEPT1Q9Y6K0 416 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 DAPL1A0PJW8 107 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 IZUMO1RA6ND01 250 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 H0Y980 276 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 J3QLW9 94 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ARPC1BO15143 372 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 SLC16A6O15403 523 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 SPINT2O43291 252 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 NDUFA3O95167 84 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 BRI3O95415 125 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ZNF19P17023 458 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 HOXB6P17509 224 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 RBM11P57052 281 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 CX3CL1P78423 397 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ADARB1P78563 741 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 TMED1Q13445 227 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ALKBH1Q13686 389 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 ATAD3CQ5T2N8 411 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 SYT6Q5T7P8 510 aaPredicted RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 ZNF660Q6AZW8 331 aaPredicted RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 ASCL4Q6XD76 172 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 LINC00322Q6ZN03 302 aaPredicted RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 KCTD20Q7Z5Y7 419 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 PARP16Q8N5Y8 322 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 TCTEX1D1Q8N7M0 179 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 NPBQ8NG41 125 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 OR4K15Q8NH41 348 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 OR52N1Q8NH53 320 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ABHD5Q8WTS1 349 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 PELI1Q96FA3 418 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 FAM103A1Q9BTL3 118 aaKnown RBP7.97□□□□□ -1.13
VPS29-208ENST00000550267 THTPAQ9BU02 230 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 FBXL15Q9H469 300 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 PLEKHA3Q9HB20 300 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 ING4Q9UNL4 249 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 NUBP2Q9Y5Y2 271 aa7.97□□□□□ -1.13
VPS29-208ENST00000550267 FCN1O00602 326 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 MAGEB3O15480 346 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 BPNT1O95861 308 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 HBZP02008 142 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 RAB3AP20336 220 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 POLR2IP36954 125 aaKnown RBP7.96□□□□□ -1.14
VPS29-208ENST00000550267 GNMTQ14749 295 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 NHLRC3Q5JS37 347 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 KDM4DQ6B0I6 523 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 PYHIN1Q6K0P9 492 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 CD200R1LQ6Q8B3 271 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 UNQ5815/PRO19632Q6UWF5 114 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 IL34Q6ZMJ4 242 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 C5orf24Q7Z6I8 188 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 PPP1R27Q86WC6 154 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 OR9G4Q8NGQ1 327 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 TSEN15Q8WW01 171 aaKnown RBP7.96□□□□□ -1.14
VPS29-208ENST00000550267 CPNE2Q96FN4 548 aaPredicted RBP7.96□□□□□ -1.14
VPS29-208ENST00000550267 C4orf36Q96KX1 117 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 CNOT2Q9NZN8 540 aaKnown RBP7.96□□□□□ -1.14
VPS29-208ENST00000550267 TRAPPC2LQ9UL33 140 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 DHDHQ9UQ10 334 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 GAB2Q9UQC2 676 aa7.96□□□□□ -1.14
VPS29-208ENST00000550267 A0A1W2PP11 408 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 TCRBV3S1A0A5B6 114 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ANKRD34BA5PLL1 514 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 J3QRE1 110 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 RRHO14718 337 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 TRGV3P03979 118 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 T-ENOLP0DO92 83 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 SERPINA2P20848 420 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ZP3P21754 424 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 TMEM267Q0VDI3 215 aaPredicted RBP7.95□□□□□ -1.14
VPS29-208ENST00000550267 KLF5Q13887 457 aaPredicted RBP7.95□□□□□ -1.14
VPS29-208ENST00000550267 PLGLAQ15195 96 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 MPV17LQ2QL34 196 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 TMEM30BQ3MIR4 351 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 MORN2Q502X0 79 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ACTBL2Q562R1 376 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 C6orf183Q5T699 404 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 STEAP3Q658P3 488 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 LCN12Q6JVE5 192 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ZNF529Q6P280 563 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 STX19Q8N4C7 294 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 RPP25LQ8N5L8 163 aaKnown RBP7.95□□□□□ -1.14
VPS29-208ENST00000550267 OR52L2PQ8NGH6 319 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 OR8J1Q8NGP2 316 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 RFKQ969G6 155 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ABHD14AQ9BUJ0 271 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 ST6GALNAC5Q9BVH7 336 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 METTL9Q9H1A3 318 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 SLA2Q9H6Q3 261 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 RANGRFQ9HD47 186 aaPredicted RBP7.95□□□□□ -1.14
VPS29-208ENST00000550267 RAB9BQ9NP90 201 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 MED4Q9NPJ6 270 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 OR2S2Q9NQN1 319 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 TAS2R4Q9NYW5 299 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 IL36GQ9NZH8 169 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 RNF150Q9ULK6 438 aa7.95□□□□□ -1.14
VPS29-208ENST00000550267 DNAH10Q8IVF4 4471 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 G3V2T6 193 aa7.94□□□□□ -1.14
VPS29-208ENST00000550267 CSN3P07498 182 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms