RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 HSPB6O14558 160 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 NFYAP23511 347 aaPredicted RBP16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 HERPUD1Q15011 391 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 TMEM65Q6PI78 240 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 GSG1LQ6UXU4 331 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 PLPPR1Q8TBJ4 325 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 LRRC29Q8WV35 223 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 WDR89Q96FK6 387 aaPredicted RBP16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 NMES1Q9C002 83 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 ESM1Q9NQ30 184 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 IL19Q9UHD0 177 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 CMYA5Q8N3K9 4069 aa16.52■□□□□ 0.24
CTDSP2-204ENST00000548823 TRBV6-7A0A0A0MS04 114 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 VSTM5A8MXK1 200 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 SLC25A4P12235 298 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 RBMXP38159 391 aaKnown RBP16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 SLC9A3R2Q15599 337 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 NDUFA5Q16718 116 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 ANKRD55Q3KP44 614 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 ABCA11PQ4W5N1 156 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 KCTD9Q7L273 389 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 GRPEL2Q8TAA5 225 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 TOMM40LQ969M1 308 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 OR2V2Q96R30 315 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 PDCD10Q9BUL8 212 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 NAA60Q9H7X0 242 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 UFSP2Q9NUQ7 469 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 COMMD9Q9P000 198 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 IGKV1-6A0A0C4DH72 117 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 TEX13DA0A0J9YY54 714 aaPredicted RBP16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 WNT9BO14905 357 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 LHBP01229 141 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 TNFSF4P23510 183 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 ZNF81P51508 661 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 PIGPP57054 158 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 UBA52P62987 128 aaKnown RBP16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 HMGN3Q15651 99 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 VHLLQ6RSH7 139 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 C1orf229Q6ZS94 237 aaPredicted RBP16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 ZNF767PQ75MW2 155 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 LRTM2Q8N967 370 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 LPAR2Q9HBW0 351 aa16.51■□□□□ 0.23
CTDSP2-204ENST00000548823 TRAV14DV4A0A0A6YYC5 116 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 hCG_1807616A0A1W2PRN6 198 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 TMEM30CPA0ZSE6 113 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 CD55P08174 381 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 FXYD4P59646 89 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 LDLRAD3Q86YD5 345 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 H1FOOQ8IZA3 346 aaPredicted RBP16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 ZCCHC24Q8N2G6 241 aaKnown RBP16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 CLDND2Q8NHS1 167 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 Q8TCH9 128 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 SLC2A9Q9NRM0 540 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 OR14J1Q9UGF5 321 aa16.5■□□□□ 0.23
CTDSP2-204ENST00000548823 IGHV3-64DA0A0J9YX35 117 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 C3orf80F5H4A9 247 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 CCSO14618 274 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 RPA2P15927 270 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 RCC1P18754 421 aaPredicted RBP16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 OR5T2Q8NGG2 359 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 OR10J5Q8NHC4 309 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 ITLN1Q8WWA0 313 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 TRAPPC2LQ9UL33 140 aa16.49■□□□□ 0.23
CTDSP2-204ENST00000548823 LOC105371242A0A075B767 164 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 TRAV20A0A0B4J274 112 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 LYNX1G3V0Z9 82 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 L7N2F9 121 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 BET1O15155 118 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 PSPNO60542 156 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 IGHV1-46P01743 117 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 WNT2P09544 360 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 LYNX1P0DP58 116 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 TMEM187Q14656 261 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 C11orf87Q6NUJ2 197 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 GCSAMQ8N6F7 178 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 PPP1R35Q8TAP8 253 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 KIRREL1Q96J84 757 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 C2orf50Q96LR7 162 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 TOLLIPQ9H0E2 274 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 NCOR1P1Q9H4R4 102 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 HEXA-AS1Q9H8Q6 139 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 OR2W1Q9Y3N9 320 aa16.48■□□□□ 0.23
CTDSP2-204ENST00000548823 C5orf51A6NDU8 294 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 GPR31O00270 319 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 SPRY3O43610 288 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 AVPP01185 164 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 CXCL2P19875 107 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 GNRHRP30968 328 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 PRDX2P32119 198 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 OR3A1P47881 315 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 TNFAIP6P98066 277 aaPredicted RBP16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 TRAT1Q6PIZ9 186 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 ZNF565Q8N9K5 539 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 PPP1R1CQ8WVI7 109 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 UNKLQ9H9P5 680 aaKnown RBP16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 KCNIP1Q9NZI2 227 aa16.47■□□□□ 0.23
CTDSP2-204ENST00000548823 OOEPA6NGQ2 149 aa16.46■□□□□ 0.23
CTDSP2-204ENST00000548823 M0R233 179 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms