RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NEDD4LQ96PU5 975 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 FAAP24Q9BTP7 215 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 PLGRKTQ9HBL7 147 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-217ENST00000548420 PDCD5O14737 125 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 NAPSAO96009 420 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 HBZP02008 142 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 PSMB9P28065 219 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 BLVRBP30043 206 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-217ENST00000548420 VEGFCP49767 419 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 LTC4SQ16873 150 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 STEAP3Q658P3 488 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-217ENST00000548420 C10orf99Q6UWK7 81 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 C16orf82Q7Z2V1 217 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 C6orf201Q7Z4U5 140 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 NR2C2APQ86WQ0 139 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 TMEM219Q86XT9 240 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 ZNF439Q8NDP4 499 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 URM1Q9BTM9 101 aaKnown RBP11.02□□□□□ -0.65
PTCH1-217ENST00000548420 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
PTCH1-217ENST00000548420 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 STEAP1Q9UHE8 339 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 HSF4Q9ULV5 492 aa11.02□□□□□ -0.65
PTCH1-217ENST00000548420 TRBV6-6A0A0A6YYG2 114 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 IFITM5A6NNB3 132 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-217ENST00000548420 SOCS1O15524 211 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 SPINT2O43291 252 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 PEX14O75381 377 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 RAB7AP51149 207 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 ARHGDIBP52566 201 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 CLDN12P56749 244 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 OR10A3P58181 314 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 BLCAPP62952 87 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 ZNF816Q0VGE8 651 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-217ENST00000548420 MADCAM1Q13477 382 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 DIAPH2-AS1Q14236 149 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 LY6G6FQ5SQ64 297 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 C22orf42Q6IC83 251 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 SLC25A48Q6ZT89 311 aaKnown RBP11.01□□□□□ -0.65
PTCH1-217ENST00000548420 OR1L1Q8NH94 360 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 UBALD1Q8TB05 177 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 RPEQ96AT9 228 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 LIN7BQ9HAP6 207 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 TXNL4BQ9NX01 149 aaKnown RBP11.01□□□□□ -0.65
PTCH1-217ENST00000548420 ZMAT5Q9UDW3 170 aaKnown RBP11.01□□□□□ -0.65
PTCH1-217ENST00000548420 RAB22AQ9UL26 194 aa11.01□□□□□ -0.65
PTCH1-217ENST00000548420 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 A0A1W2PPE3 182 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 RAB3BP20337 219 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 MYL9P24844 172 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 CD24P25063 80 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 MNDAP41218 407 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 THBS3P49746 956 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 GNG10P50151 68 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 LUMP51884 338 aaPredicted RBP11□□□□□ -0.65
PTCH1-217ENST00000548420 ZNF134P52741 427 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 ZNF137PP52743 207 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 HTD2P86397 168 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 PLA2G7Q13093 441 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 HMGN3Q15651 99 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 HES5Q5TA89 166 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 OR8H3Q8N146 312 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 TOMM40LQ969M1 308 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
PTCH1-217ENST00000548420 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
PTCH1-217ENST00000548420 PLEKHJ1Q9NW61 149 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 STUB1Q9UNE7 303 aa11□□□□□ -0.65
PTCH1-217ENST00000548420 IGHV3-43A0A0B4J1X8 118 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 SLC31A2O15432 143 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 OR2F2O95006 317 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 AMY1AP04745 511 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 AMY2AP04746 511 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 IGHV3-43DP0DP04 118 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 EBI3Q14213 229 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 MORN2Q502X0 79 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 CT45A1Q5HYN5 189 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 PLAC9Q5JTB6 97 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 C5orf24Q7Z6I8 188 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 TPRA1Q86W33 373 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 OR10X1Q8NGY0 326 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 CT45A3Q8NHU0 189 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 LINC00476Q8WZB0 136 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 PTX4Q96A99 478 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 PRSS22Q9GZN4 317 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 KCNIP1Q9NZI2 227 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
PTCH1-217ENST00000548420 YPEL1O60688 119 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 GAPDHP04406 335 aaKnown RBP10.98□□□□□ -0.65
PTCH1-217ENST00000548420 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 RAB6AP20340 208 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 ECI1P42126 302 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 VDAC2P45880 294 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-217ENST00000548420 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 OR56B1Q8NGI3 324 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms