RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ITGB1BP1O14713 200 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 SLC31A2O15432 143 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 HSPA12AO43301 675 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 GAPDHP04406 335 aaKnown RBP13.54□□□□□ -0.24
CCDC38-203ENST00000546803 LPLP06858 475 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ZNF134P52741 427 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ZNF816Q0VGE8 651 aaPredicted RBP13.54□□□□□ -0.24
CCDC38-203ENST00000546803 OR2AK2Q8NG84 335 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ISOC1Q96CN7 298 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 SLC23A1Q9UHI7 598 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
CCDC38-203ENST00000546803 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 CEPT1Q9Y6K0 416 aa13.54□□□□□ -0.24
CCDC38-203ENST00000546803 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 H3BMQ9 156 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 CEACAM6P40199 344 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 RAB13P51153 203 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 LY6EQ16553 131 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 KIAA2026Q5HYC2 2103 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 IZUMO1Q8IYV9 350 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 NUDCD2Q8WVJ2 157 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 EDARADDQ8WWZ3 215 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 CABLES2Q9BTV7 478 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 GHITMQ9H3K2 345 aa13.53□□□□□ -0.24
CCDC38-203ENST00000546803 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
CCDC38-203ENST00000546803 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 A6NDX4 124 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 HSD17B6O14756 317 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 TXNL1O43396 289 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 SSX5O60225 188 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
CCDC38-203ENST00000546803 CTXN2P0C2S0 81 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 GSTT2P0CG29 244 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 GSTT2BP0CG30 244 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 FOXL1Q12952 345 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 HERPUD1Q15011 391 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 DHRS7BQ6IAN0 325 aaPredicted RBP13.52□□□□□ -0.25
CCDC38-203ENST00000546803 THNSL2Q86YJ6 484 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 LYG1Q8N1E2 194 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 DYNC2LI1Q8TCX1 351 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 MAFIPQ8WZ33 124 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 TOLLIPQ9H0E2 274 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 C1RLQ9NZP8 487 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 OR1A1Q9P1Q5 309 aa13.52□□□□□ -0.25
CCDC38-203ENST00000546803 A0A1W2PPI3 338 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 TIMM23O14925 209 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 LANCL1O43813 399 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 HPGDSO60760 199 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 NDUFA7O95182 113 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 FAM106CPP0CH98 169 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 CBX5P45973 191 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 COMPP49747 757 aaPredicted RBP13.51□□□□□ -0.25
CCDC38-203ENST00000546803 TAS2R20P59543 309 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 DIAPH2-AS1Q14236 149 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 TGIF2LXQ8IUE1 241 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 DTX3Q8N9I9 347 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 OR10J5Q8NHC4 309 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 RTN4IP1Q8WWV3 396 aaPredicted RBP13.51□□□□□ -0.25
CCDC38-203ENST00000546803 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
CCDC38-203ENST00000546803 TRBV6-7A0A0A0MS04 114 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 IGHV1-3A0A0C4DH29 117 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 FAM90A9PA6NNJ1 464 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
CCDC38-203ENST00000546803 ELK1P19419 428 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
CCDC38-203ENST00000546803 IGSF11Q5DX21 431 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 CNIH2Q6PI25 160 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
CCDC38-203ENST00000546803 C16orf82Q7Z2V1 217 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 ODF3L1Q8IXM7 274 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 DRAM1Q8N682 238 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 OR4F5Q8NH21 305 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 SPATA3Q8NHX4 192 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 CAPSLQ8WWF8 208 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 C11orf54Q9H0W9 315 aaPredicted RBP13.5□□□□□ -0.25
CCDC38-203ENST00000546803 IFI27L2Q9H2X8 130 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 RDH8Q9NYR8 311 aa13.5□□□□□ -0.25
CCDC38-203ENST00000546803 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 RAB29O14966 203 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 BET1O15155 118 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 ST8SIA5O15466 376 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 REG1BP48304 166 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 RAG2P55895 527 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 MOB3BQ86TA1 216 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 HOGA1Q86XE5 327 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 OR56B4Q8NH76 319 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 CFHR4Q92496 578 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 AKR1E2Q96JD6 320 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 S1PR3Q99500 378 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms