RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 LOXL3P58215 753 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 TAS2R46P59540 309 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 MADCAM1Q13477 382 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 GAMTQ14353 236 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 SURF2Q15527 256 aaPredicted RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 SPRNQ5BIV9 151 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 STUMQ69YW2 141 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 PLET1Q6UQ28 207 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 SELENOHQ8IZQ5 122 aaKnown RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 MUC15Q8N387 334 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 LINC01356Q8N9X3 169 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 SUMF2Q8NBJ7 301 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 BEST4Q8NFU0 473 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 OR56B4Q8NH76 319 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 MRPL30Q8TCC3 161 aaKnown RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 SDSLQ96GA7 329 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 ZNF486Q96H40 463 aaPredicted RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 PRRT1Q99946 306 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 CMSS1Q9BQ75 279 aaKnown RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 SLC25A21Q9BQT8 299 aaPredicted RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 CABLES2Q9BTV7 478 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 DPCDQ9BVM2 203 aaPredicted RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 NARFLQ9H6Q4 476 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 Q9N2K0 584 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 IFT46Q9NQC8 304 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 CBLN4Q9NTU7 201 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 C1orf123Q9NWV4 160 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 CLEC5AQ9NY25 188 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 NLKQ9UBE8 527 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 RNF7Q9UBF6 113 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 OPN4Q9UHM6 478 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 ANXA10Q9UJ72 324 aa7.02□□□□□ -1.29
VPS29-203ENST00000546588 STRAPQ9Y3F4 350 aaKnown RBP7.02□□□□□ -1.29
VPS29-203ENST00000546588 IGKV1D-17A0A075B6S4 117 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 A0A1W2PPR1 153 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 CBY3A6NI87 242 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 A6NNC1 897 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 MCRIP1C9JLW8 97 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 PRAF2O60831 178 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 NXPH2O95156 264 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 IFNA2P01563 188 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 CD8AP01732 235 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 PRB1P04280 392 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 PSG2P11465 335 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 GLRA1P23415 457 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 GCSHP23434 173 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 ERP29P30040 261 aaKnown RBP7.01□□□□□ -1.29
VPS29-203ENST00000546588 OR3A3P47888 321 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 SLURP1P55000 103 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 DEFA6Q01524 100 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 GRK1Q15835 563 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 MICBQ29980 383 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 RSBN1Q5VWQ0 802 aaPredicted RBP7.01□□□□□ -1.29
VPS29-203ENST00000546588 SLC35E4Q6ICL7 350 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 DHRS11Q6UWP2 260 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 C17orf107Q6ZR85 190 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 ZNF826PQ6ZT77 177 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 ZDHHC22Q8N966 263 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 OR13C8Q8NGS7 320 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 LRRC29Q8WV35 223 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 NEUROG1Q92886 237 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 RNF125Q96EQ8 232 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 PIK3IP1Q96FE7 263 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 CYYR1Q96J86 154 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 ZNF488Q96MN9 340 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 FAAP24Q9BTP7 215 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 TRAF4Q9BUZ4 470 aaPredicted RBP7.01□□□□□ -1.29
VPS29-203ENST00000546588 EGLN1Q9GZT9 426 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 SHARPINQ9H0F6 387 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 FAM234AQ9H0X4 552 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 C20orf85Q9H1P6 137 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 WDR13Q9H1Z4 485 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 OR51M1Q9H341 326 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 SLA2Q9H6Q3 261 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 SAP30LQ9HAJ7 183 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 KAAG1Q9UBP8 84 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 GLS2Q9UI32 602 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 NAGKQ9UJ70 344 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 POU2F3Q9UKI9 436 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 DOPEY1Q5JWR5 2465 aa7.01□□□□□ -1.29
VPS29-203ENST00000546588 IGKV1D-8A0A087WSZ0 117 aa7□□□□□ -1.29
VPS29-203ENST00000546588 KIR2DS1A0A191URI9 304 aa7□□□□□ -1.29
VPS29-203ENST00000546588 MEX3AA1L020 520 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 OR2AT4A6NND4 320 aa7□□□□□ -1.29
VPS29-203ENST00000546588 DEGS1O15121 323 aa7□□□□□ -1.29
VPS29-203ENST00000546588 TCAPO15273 167 aa7□□□□□ -1.29
VPS29-203ENST00000546588 SPRY3O43610 288 aa7□□□□□ -1.29
VPS29-203ENST00000546588 SCGB2A1O75556 95 aa7□□□□□ -1.29
VPS29-203ENST00000546588 RP2O75695 350 aa7□□□□□ -1.29
VPS29-203ENST00000546588 MT-ND4P03905 459 aa7□□□□□ -1.29
VPS29-203ENST00000546588 IFNA4P05014 189 aa7□□□□□ -1.29
VPS29-203ENST00000546588 S100A8P05109 93 aa7□□□□□ -1.29
VPS29-203ENST00000546588 IL5P05113 134 aa7□□□□□ -1.29
VPS29-203ENST00000546588 WNT2P09544 360 aa7□□□□□ -1.29
VPS29-203ENST00000546588 CTXN2P0C2S0 81 aa7□□□□□ -1.29
VPS29-203ENST00000546588 HLA-DMAP28067 261 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms