RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 C4orf36Q96KX1 117 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 FANCD2OSQ96PS1 177 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 METTL9Q9H1A3 318 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 CNOT2Q9NZN8 540 aaKnown RBP9.69□□□□□ -0.86
SCAF11-208ENST00000546534 TRAPPC2LQ9UL33 140 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 ING4Q9UNL4 249 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 DHDHQ9UQ10 334 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 GAB2Q9UQC2 676 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 FRAS1Q86XX4 4008 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 SHISA3A0PJX4 238 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 IZUMO1RA6ND01 250 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 J3QRE1 110 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 H2AFB1P0C5Y9 115 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 H2AFB2P0C5Z0 115 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 RCC1P18754 421 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-208ENST00000546534 ZP3P21754 424 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 CALB2P22676 271 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-208ENST00000546534 FLOT2Q14254 428 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 GNMTQ14749 295 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 ACTBL2Q562R1 376 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 TSEN15Q8WW01 171 aaKnown RBP9.68□□□□□ -0.86
SCAF11-208ENST00000546534 FAM103A1Q9BTL3 118 aaKnown RBP9.68□□□□□ -0.86
SCAF11-208ENST00000546534 RIBC2Q9H4K1 309 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 RANGRFQ9HD47 186 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-208ENST00000546534 RAB9BQ9NP90 201 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 OR2S2Q9NQN1 319 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 RNF150Q9ULK6 438 aa9.68□□□□□ -0.86
SCAF11-208ENST00000546534 ANKRD34BA5PLL1 514 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 G3V2T6 193 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 RRHO14718 337 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 TRGV3P03979 118 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 SERPINA2P20848 420 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 PPP1CCP36873 323 aaKnown RBP9.67□□□□□ -0.86
SCAF11-208ENST00000546534 OR3A3P47888 321 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 MPV17LQ2QL34 196 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 AKIRIN2Q53H80 203 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 C6orf183Q5T699 404 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 LINC00596Q86U02 117 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 LFNGQ8NES3 379 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 OR52L2PQ8NGH6 319 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 OR5AK2Q8NH90 309 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 CIB1Q99828 191 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 PDCD1LG2Q9BQ51 273 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 ABHD14AQ9BUJ0 271 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 SLA2Q9H6Q3 261 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 TAS2R4Q9NYW5 299 aa9.67□□□□□ -0.86
SCAF11-208ENST00000546534 A0A1W2PP11 408 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 E9PI62 339 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 FSTP19883 344 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 CD40LGP29965 261 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 SOX2P48431 317 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 PLGLAQ15195 96 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 FAM131AQ6UXB0 335 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ZNF833PQ6ZTB9 187 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 C5orf24Q7Z6I8 188 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 Q8N402 240 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ACBD7Q8N6N7 88 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 RDH12Q96NR8 316 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ST6GALNAC5Q9BVH7 336 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ISG20L2Q9H9L3 353 aaKnown RBP9.66□□□□□ -0.86
SCAF11-208ENST00000546534 TAF9BQ9HBM6 251 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ETAA1Q9NY74 926 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 ENOPH1Q9UHY7 261 aa9.66□□□□□ -0.86
SCAF11-208ENST00000546534 MCRIP1C9JLW8 97 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 TFAP2AP05549 437 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 CSN3P07498 182 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 RPSAP08865 295 aaKnown RBP9.65□□□□□ -0.86
SCAF11-208ENST00000546534 CD81P60033 236 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 TRAT1Q6PIZ9 186 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 GAPTQ8N292 157 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 TMEM106AQ96A25 262 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 CLCC1Q96S66 551 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 S100A13Q99584 98 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 JAM3Q9BX67 310 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 GABARAPL1Q9H0R8 117 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 FAM53CQ9NYF3 392 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.86
SCAF11-208ENST00000546534 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
SCAF11-208ENST00000546534 SAA2-SAA4A0A096LPE2 208 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 C13orf42A0A1B0GVH6 325 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 TPPPO94811 219 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 FADS2O95864 444 aaKnown RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 SAA2P0DJI9 122 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 GTF2F2P13984 249 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF93P35789 620 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 MECP2P51608 486 aaKnown RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 ATP6AP1Q15904 470 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 SLC22A6Q4U2R8 563 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms