RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 FAAP24Q9BTP7 215 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 TM2D1Q9BX74 207 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 VCX3BQ9H321 246 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 GHITMQ9H3K2 345 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 PLGRKTQ9HBL7 147 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 ISYNA1Q9NPH2 558 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 PLEKHJ1Q9NW61 149 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 ZNF107Q9UII5 783 aaPredicted RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 MGAT4AQ9UM21 535 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 LSM2Q9Y333 95 aaKnown RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 TMEM14DPA8MWL7 114 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 ANKRD65E5RJM6 399 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 CCL24O00175 119 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 RGS10O43665 173 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 IGF1P05019 195 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 CD37P11049 281 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 CDX1P47902 265 aaPredicted RBP7.36□□□□□ -1.23
YBX3-218ENST00000546298 PSMD7P51665 324 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 ACTBP60709 375 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 EGFEM1PQ0D2K5 195 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 TPBGQ13641 420 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 IRF3Q14653 427 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 GNMTQ14749 295 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 KIR2DS1Q14954 304 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 HMGN3Q15651 99 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 FAM27D1Q5T7N8 215 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 LIPKQ5VXJ0 399 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 OR10K2Q6IF99 312 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 FAM71F2Q6NXP2 309 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 ETV3LQ6ZN32 361 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 C6orf201Q7Z4U5 140 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 FAM71E2Q8N5Q1 922 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 OR8U1Q8NH10 309 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 IL1F10Q8WWZ1 152 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 TMEM203Q969S6 136 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 DUSP21Q9H596 190 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 PIPOXQ9P0Z9 390 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 KIAA1456Q9P272 454 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 PLXNB1O43157 2135 aa7.36□□□□□ -1.23
YBX3-218ENST00000546298 TRBV6-6A0A0A6YYG2 114 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 K7EIL1 84 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 SLC17A2O00624 439 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 RAB29O14966 203 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 NBR2O15453 112 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 NAPSAO96009 420 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 IGHG4P01861 327 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 RPLP1P05386 114 aaKnown RBP7.35□□□□□ -1.23
YBX3-218ENST00000546298 ARSBP15848 533 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 MC5RP33032 325 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 HSPA13P48723 471 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 F2RL1P55085 397 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 AQP4P55087 323 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 QRFPP83859 136 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
YBX3-218ENST00000546298 RAB11BQ15907 218 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 LIN54Q6MZP7 749 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 TMEM65Q6PI78 240 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 ZNF833PQ6ZTB9 187 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 C18orf65Q6ZTR6 163 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 OR5M8Q8NGP6 311 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 SETD6Q8TBK2 473 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 RAX2Q96IS3 184 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 KCTD7Q96MP8 289 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 NABP2Q9BQ15 211 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 HSPB9Q9BQS6 159 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 MRPL20Q9BYC9 149 aaKnown RBP7.35□□□□□ -1.23
YBX3-218ENST00000546298 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 ACOT13Q9NPJ3 140 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 NKX1-2Q9UD57 310 aaPredicted RBP7.35□□□□□ -1.23
YBX3-218ENST00000546298 SLC23A1Q9UHI7 598 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 HSF4Q9ULV5 492 aa7.35□□□□□ -1.23
YBX3-218ENST00000546298 VWFP04275 2813 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 SAA2-SAA4A0A096LPE2 208 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 RAMP3O60896 148 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 RBBP9O75884 186 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 HLA-DRB1P01911 266 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 SAA2P0DJI9 122 aaPredicted RBP7.34□□□□□ -1.23
YBX3-218ENST00000546298 SLC2A2P11168 524 aaPredicted RBP7.34□□□□□ -1.23
YBX3-218ENST00000546298 MYF6P23409 242 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 ZBTB25P24278 435 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
YBX3-218ENST00000546298 OR3A3P47888 321 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 RAB25P57735 213 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 KRTAP10-11P60412 298 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 DGCR2P98153 550 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 UNC119Q13432 240 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 P2RY14Q15391 338 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 C5orf64Q2M2E5 130 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 ZNF880Q6PDB4 577 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 LCNL1Q6ZST4 164 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 PRSS48Q7RTY5 328 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 ODF3L1Q8IXM7 274 aa7.34□□□□□ -1.23
YBX3-218ENST00000546298 FAM89BQ8N5H3 189 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 382.7 ms