RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 HKR1P10072 659 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 LOXL3P58215 753 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 LY6G6FQ5SQ64 297 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 TGIF2LXQ8IUE1 241 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 OR4C13Q8NGP0 309 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 C15orf40Q8WUR7 153 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 NAA50Q9GZZ1 169 aaKnown RBP14.14□□□□□ -0.15
CD9-211ENST00000546073 IFT46Q9NQC8 304 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 PIPOXQ9P0Z9 390 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 ZNF221Q9UK13 617 aa14.14□□□□□ -0.15
CD9-211ENST00000546073 ZFHX3Q15911 3703 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 TMEM235A6NFC5 223 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 BET1O15155 118 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 RGS5O15539 181 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 XRCC3O43542 346 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 APOA1P02647 267 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 PPP1CCP36873 323 aaKnown RBP14.13□□□□□ -0.15
CD9-211ENST00000546073 ARPC4P59998 168 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 SLC25A48Q6ZT89 311 aaKnown RBP14.13□□□□□ -0.15
CD9-211ENST00000546073 C16orf82Q7Z2V1 217 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 C3orf56Q8N813 242 aa14.13□□□□□ -0.15
CD9-211ENST00000546073 RAB29O14966 203 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 PEX14O75381 377 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 DIRAS3O95661 229 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 SCTP09683 121 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 RAB13P51153 203 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 ZNF260Q3ZCT1 412 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 OLFML2AQ68BL7 652 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 IZUMO1Q8IYV9 350 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 SPATA3Q8NHX4 192 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 TCF19Q9Y242 345 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 MRPS7Q9Y2R9 242 aaKnown RBP14.12□□□□□ -0.15
CD9-211ENST00000546073 KCNK7Q9Y2U2 307 aa14.12□□□□□ -0.15
CD9-211ENST00000546073 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 M0QZK8 103 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 RAG2P55895 527 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 ZNF816Q0VGE8 651 aaPredicted RBP14.11□□□□□ -0.15
CD9-211ENST00000546073 CT45A1Q5HYN5 189 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 THNSL2Q86YJ6 484 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 CT45A3Q8NHU0 189 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 SLC25A38Q96DW6 304 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 MDFIQ99750 246 aa14.11□□□□□ -0.15
CD9-211ENST00000546073 LY6LH3BQJ8 138 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 ITGB1BP1O14713 200 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 PAX6P26367 422 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 PRSS3P35030 304 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 Q6ZS49 121 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 DYNAPQ8N1N2 210 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 OR2T6Q8NHC8 308 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 NUDCD2Q8WVJ2 157 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 PRSS22Q9GZN4 317 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 AUNIPQ9H7T9 357 aa14.1□□□□□ -0.15
CD9-211ENST00000546073 ZNF230Q9UIE0 474 aaPredicted RBP14.1□□□□□ -0.15
CD9-211ENST00000546073 IGHV1-3A0A0C4DH29 117 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 TIMM23O14925 209 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 LANCL1O43813 399 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 NDUFA7O95182 113 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 GSTT2P0CG29 244 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 GSTT2BP0CG30 244 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 TMEM11P17152 192 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 GPR12P47775 334 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 REG1BP48304 166 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 CBX3Q13185 183 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 GNMTQ14749 295 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 CNIH2Q6PI25 160 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 C11orf88Q6PI97 169 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 DRAM1Q8N682 238 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 OR2T10Q8NGZ9 312 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 MAFIPQ8WZ33 124 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 ISOC1Q96CN7 298 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 AJUBAQ96IF1 538 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 RANBP3Q9H6Z4 567 aaPredicted RBP14.09□□□□□ -0.15
CD9-211ENST00000546073 C1RLQ9NZP8 487 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 NDUFA13Q9P0J0 144 aa14.09□□□□□ -0.15
CD9-211ENST00000546073 KIAA2026Q5HYC2 2103 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 MXRA5Q9NR99 2828 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 HPGDSO60760 199 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 CD1BP29016 333 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 OR3A3P47888 321 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 TAS2R20P59543 309 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 FAM71F2Q6NXP2 309 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 ZNF439Q8NDP4 499 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 BEST4Q8NFU0 473 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 OR56B4Q8NH76 319 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 RTN4IP1Q8WWV3 396 aaPredicted RBP14.08□□□□□ -0.16
CD9-211ENST00000546073 NECAP2Q9NVZ3 263 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 RDH8Q9NYR8 311 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 CCDC59Q9P031 241 aaKnown RBP14.08□□□□□ -0.16
CD9-211ENST00000546073 RABL2AQ9UBK7 228 aaPredicted RBP14.08□□□□□ -0.16
CD9-211ENST00000546073 RSL24D1Q9UHA3 163 aaKnown RBP14.08□□□□□ -0.16
CD9-211ENST00000546073 ANXA10Q9UJ72 324 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 RABL2BQ9UNT1 228 aa14.08□□□□□ -0.16
CD9-211ENST00000546073 A6NDX4 124 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 ST8SIA5O15466 376 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 SLC22A5O76082 557 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
CD9-211ENST00000546073 ZNF134P52741 427 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 ZNF137PP52743 207 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 SPCS2Q15005 226 aa14.07□□□□□ -0.16
CD9-211ENST00000546073 TMEM219Q86XT9 240 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms