RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 RAB11AP62491 216 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
CNN3-207ENST00000545882 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 MDP1Q86V88 176 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 SCGB1C1Q8TD33 95 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 C12orf49Q9H741 205 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
CNN3-207ENST00000545882 LRP5LA4QPB2 252 aa12.9□□□□□ -0.34
CNN3-207ENST00000545882 ZFP92A6NM28 416 aa12.9□□□□□ -0.34
CNN3-207ENST00000545882 MDH2P40926 338 aaKnown RBP12.9□□□□□ -0.34
CNN3-207ENST00000545882 CLN3Q13286 438 aa12.9□□□□□ -0.34
CNN3-207ENST00000545882 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
CNN3-207ENST00000545882 SCCPDHQ8NBX0 429 aa12.9□□□□□ -0.34
CNN3-207ENST00000545882 RCC1LQ96I51 464 aaKnown RBP12.9□□□□□ -0.34
CNN3-207ENST00000545882 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 CYB5BO43169 146 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 SP9P0CG40 484 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 CD59P13987 128 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 ZNF16P17020 682 aaPredicted RBP12.9□□□□□ -0.35
CNN3-207ENST00000545882 PLGLB1Q02325 96 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 PYY3Q5JQD4 70 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 DCAF10Q5QP82 559 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 PLA2G2CQ5R387 149 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 VASH2Q86V25 355 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 DRAM1Q8N682 238 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 OR4C12Q96R67 309 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.35
CNN3-207ENST00000545882 B4DEV8 164 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 TRGC2P03986 189 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 RND2P52198 227 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 WDR61Q9GZS3 305 aaKnown RBP12.89□□□□□ -0.35
CNN3-207ENST00000545882 SDF2L1Q9HCN8 221 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 TMEM9BQ9NQ34 198 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
CNN3-207ENST00000545882 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
CNN3-207ENST00000545882 C21orf140B9A014 251 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 CELA3BP08861 270 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 MEOX1P50221 254 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 SERF2P84101 59 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 ALKBH6Q3KRA9 238 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 ACSF3Q4G176 576 aaPredicted RBP12.88□□□□□ -0.35
CNN3-207ENST00000545882 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 MCEMP1Q8IX19 187 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 GPR87Q9BY21 358 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 PARD6GQ9BYG4 376 aaPredicted RBP12.88□□□□□ -0.35
CNN3-207ENST00000545882 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 KCNS2Q9ULS6 477 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 WDR1O75083 606 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 CEACAM6P40199 344 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 ERVS71-1P61550 626 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 TMEM41BQ5BJD5 291 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 C5orf30Q96GV9 206 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 SSX3Q99909 188 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 RTL8AQ9BWD3 113 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 LIN7CQ9NUP9 197 aaKnown RBP12.88□□□□□ -0.35
CNN3-207ENST00000545882 TINAGQ9UJW2 476 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 RNF150Q9ULK6 438 aa12.88□□□□□ -0.35
CNN3-207ENST00000545882 PTPRBP23467 1997 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 DOCK11Q5JSL3 2073 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
CNN3-207ENST00000545882 PHOX2AO14813 284 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 IGKV1D-33P01593 117 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 IGKV1-33P01594 117 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 SP1P08047 785 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 SPANXN5Q5MJ07 72 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 FBXW9Q5XUX1 488 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 FAM53AQ6NSI3 398 aaPredicted RBP12.87□□□□□ -0.35
CNN3-207ENST00000545882 TMEM14EPQ6UXP3 125 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 BEND4Q6ZU67 534 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 FGFRL1Q8N441 504 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
CNN3-207ENST00000545882 RBM7Q9Y580 266 aaKnown RBP12.87□□□□□ -0.35
CNN3-207ENST00000545882 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 M0R296 226 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 CDIPTO14735 213 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 CYB5R3P00387 301 aaPredicted RBP12.86□□□□□ -0.35
CNN3-207ENST00000545882 SOD3P08294 240 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 HBG1P69891 147 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 HBG2P69892 147 aa12.86□□□□□ -0.35
CNN3-207ENST00000545882 PNRC1Q12796 327 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms