RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CSF1P09603 554 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 CD3GP09693 182 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 CD1BP29016 333 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 EBI3Q14213 229 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-216ENST00000544996 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 PTX4Q96A99 478 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 EAF1Q96JC9 268 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-216ENST00000544996 CHCHD6Q9BRQ6 235 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-216ENST00000544996 OR51E2Q9H255 320 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 A0A087WXM4 84 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 LOC100506127A0A0U1RQW1 187 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 SMIM30A4D0T7 59 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 HSPA12AO43301 675 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 FGF16O43320 207 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 LANCL1O43813 399 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-216ENST00000544996 CD36P16671 472 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 ZBTB25P24278 435 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 PLA2G7Q13093 441 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 NR2C2APQ86WQ0 139 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 TSPAN14Q8NG11 270 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 Q9N2K0 584 aa12.52□□□□□ -0.41
CCDC78-216ENST00000544996 A0A0B4J203 849 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
CCDC78-216ENST00000544996 NCBP2LA6PVI3 153 aaKnown RBP12.51□□□□□ -0.41
CCDC78-216ENST00000544996 MOSP00540 346 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 CD28P10747 220 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 SDC2P34741 201 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 HLA-DRB3P79483 266 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 Q6ZPA2 131 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 C5orf56Q8N8D9 126 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 OR5AU1Q8NGC0 362 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 OR8H1Q8NGG4 311 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 ATG5Q9H1Y0 275 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 PIPOXQ9P0Z9 390 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 SLC23A1Q9UHI7 598 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
CCDC78-216ENST00000544996 NBEAL1Q6ZS30 2694 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 A0A075B6Q4 140 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 TRDCB7Z8K6 153 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 RAB27BO00194 218 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 TSPAN15O95858 294 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
CCDC78-216ENST00000544996 GNB3P16520 340 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 CEACAM6P40199 344 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 ARL6IP1Q15041 203 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 SFXN4Q6P4A7 337 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-216ENST00000544996 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-216ENST00000544996 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 S1PR3Q99500 378 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 KCNK7Q9Y2U2 307 aa12.5□□□□□ -0.41
CCDC78-216ENST00000544996 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
CCDC78-216ENST00000544996 RAB29O14966 203 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 SCGNO76038 276 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 SCTP09683 121 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 TALDO1P37837 337 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 MXD1Q05195 221 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 LSAMPQ13449 338 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 ARFRP1Q13795 201 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 KIR2DS1Q14954 304 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 Q8N6K4 173 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 CITED2Q99967 270 aaPredicted RBP12.49□□□□□ -0.41
CCDC78-216ENST00000544996 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
CCDC78-216ENST00000544996 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 MFNGO00587 321 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 ITGB1BP1O14713 200 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
CCDC78-216ENST00000544996 OR3A3P47888 321 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 SERPINB10P48595 397 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 OR4X2Q8NGF9 303 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 CENPOQ9BU64 300 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 LIN7CQ9NUP9 197 aaKnown RBP12.48□□□□□ -0.41
CCDC78-216ENST00000544996 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
CCDC78-216ENST00000544996 MGAM2Q2M2H8 2515 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 FABP7O15540 132 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 OPN1MWP04001 364 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 FCGR3AP08637 254 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms