RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 DIAPH2-AS1Q14236 149 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 C9orf152Q5JTZ5 239 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 FAM110DQ8TAY7 271 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-216ENST00000544989 CHPT1Q8WUD6 406 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 EAF1Q96JC9 268 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-216ENST00000544989 CMSS1Q9BQ75 279 aaKnown RBP9.4□□□□□ -0.9
HDAC4-216ENST00000544989 GON7Q9BXV9 100 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 PIPOXQ9P0Z9 390 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 SSR3Q9UNL2 185 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 A0A0A6YYD4 124 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 TMEM272A0A1B0GTI8 110 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
HDAC4-216ENST00000544989 FOXI3A8MTJ6 420 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SERPINE3A8MV23 424 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SLC31A2O15432 143 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SOCS1O15524 211 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SCGNO76038 276 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 TSPAN15O95858 294 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 CD28P10747 220 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 ZBTB25P24278 435 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 PPP1CCP36873 323 aaKnown RBP9.39□□□□□ -0.91
HDAC4-216ENST00000544989 REG1BP48304 166 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF134P52741 427 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 CLDN12P56749 244 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SLC35B1P78383 322 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 CD83Q01151 205 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 HNF4GQ14541 408 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 HES5Q5TA89 166 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 C22orf42Q6IC83 251 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 Q6ZS46 218 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 FOXRED2Q8IWF2 684 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 OR52L2PQ8NGH6 319 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 SETD6Q8TBK2 473 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 IL1F10Q8WWZ1 152 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 RAB3CQ96E17 227 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 S1PR3Q99500 378 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 PECRQ9BY49 303 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 KCNK15Q9H427 330 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 VCX3AQ9NNX9 186 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 LIN7CQ9NUP9 197 aaKnown RBP9.39□□□□□ -0.91
HDAC4-216ENST00000544989 AK3Q9UIJ7 227 aa9.39□□□□□ -0.91
HDAC4-216ENST00000544989 TSSC4Q9Y5U2 329 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-216ENST00000544989 NOTOA8MTQ0 251 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 RAB29O14966 203 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 HSPA12AO43301 675 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 TMEM127O75204 238 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 DIRAS3O95661 229 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 IGHG2P01859 326 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 CD3GP09693 182 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 SERPINB10P48595 397 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 TMEM50BP56557 158 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 HLA-DRB3P79483 266 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 LSAMPQ13449 338 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 KIR2DS1Q14954 304 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 NSUN5P1Q3KNT7 163 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 TIMM50Q3ZCQ8 353 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 SLC35E3Q7Z769 313 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 Q8N6K4 173 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 CITED2Q99967 270 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-216ENST00000544989 RASL11BQ9BPW5 248 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 Q9N2K0 584 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 TXNL4BQ9NX01 149 aaKnown RBP9.38□□□□□ -0.91
HDAC4-216ENST00000544989 SLC23A1Q9UHI7 598 aa9.38□□□□□ -0.91
HDAC4-216ENST00000544989 IGHV3-72A0A0B4J1Y9 119 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 TCRBV4S1A1TA0A5B7 111 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 AP4M1O00189 453 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 RRP9O43818 475 aaKnown RBP9.37□□□□□ -0.91
HDAC4-216ENST00000544989 SLC6A1P30531 599 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 SCAND1P57086 179 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 GNMTQ14749 295 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF833PQ6ZTB9 187 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 OR4A4PQ8NGN8 299 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 PHF21AQ96BD5 680 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 R3HDM4Q96D70 268 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 CHCHD6Q9BRQ6 235 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 ABCG5Q9H222 651 aa9.37□□□□□ -0.91
HDAC4-216ENST00000544989 OR5H14A6NHG9 310 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 HIST1H1DP16402 221 aaKnown RBP9.36□□□□□ -0.91
HDAC4-216ENST00000544989 MC5RP33032 325 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 CEACAM6P40199 344 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 OR10A3P58181 314 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 SRSF7Q16629 238 aaKnown RBP eCLIP9.36□□□□□ -0.913e-10■■■■■ 33.8
HDAC4-216ENST00000544989 FBLN7Q53RD9 439 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 PLAC9Q5JTB6 97 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 Q8N9W7 124 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 IFI27L2Q9H2X8 130 aa9.36□□□□□ -0.91
HDAC4-216ENST00000544989 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms