RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TGIF2LXQ8IUE1 241 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 IL1F10Q8WWZ1 152 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 WNT10AQ9GZT5 417 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 Q9N2K0 584 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 LOC100506127A0A0U1RQW1 187 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 FGF16O43320 207 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
CIT-212ENST00000543239 PEX14O75381 377 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 IGKV1D-33P01593 117 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 IGKV1-33P01594 117 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 AMY1AP04745 511 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 AMY2AP04746 511 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 VSIG10L2P0DP72 767 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 HIST1H1DP16402 221 aaKnown RBP12.96□□□□□ -0.33
CIT-212ENST00000543239 CD1BP29016 333 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 SDC2P34741 201 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 ARL6IP1Q15041 203 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 MOGAT2Q3SYC2 334 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 ABCA11PQ4W5N1 156 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 Q6ZS46 218 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 LYG1Q8N1E2 194 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 OR2AK2Q8NG84 335 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 WIPF2Q8TF74 440 aaPredicted RBP12.96□□□□□ -0.33
CIT-212ENST00000543239 DAPK2Q9UIK4 370 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
CIT-212ENST00000543239 TRIM64CA6NLI5 447 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 MFNGO00587 321 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 ITGB1BP1O14713 200 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 SCGNO76038 276 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 CD3GP09693 182 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 SCAND1P57086 179 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 OR2T10Q8NGZ9 312 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 CENPOQ9BU64 300 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 NBEAL1Q6ZS30 2694 aa12.95□□□□□ -0.34
CIT-212ENST00000543239 IGHV3-72A0A0B4J1Y9 119 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 TMEM127O75204 238 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 ZBTB25P24278 435 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 MXD1Q05195 221 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 HNF4GQ14541 408 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 C2orf68Q2NKX9 166 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 FAM71F2Q6NXP2 309 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 ODF3L1Q8IXM7 274 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 Q8N6K4 173 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 C5orf56Q8N8D9 126 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 EAF1Q96JC9 268 aaPredicted RBP12.94□□□□□ -0.34
CIT-212ENST00000543239 ATG5Q9H1Y0 275 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 GHITMQ9H3K2 345 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
CIT-212ENST00000543239 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
CIT-212ENST00000543239 TRDCB7Z8K6 153 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 FBXO24O75426 580 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 MOSP00540 346 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 FCGR3AP08637 254 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 SCTP09683 121 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 GNB3P16520 340 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 TMEM95Q3KNT9 176 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 OR4A4PQ8NGN8 299 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 LGALS14Q8TCE9 139 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 EDARADDQ8WWZ3 215 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 IFI27L2Q9H2X8 130 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 PIPOXQ9P0Z9 390 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 SLC23A1Q9UHI7 598 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 ETV7Q9Y603 341 aa12.93□□□□□ -0.34
CIT-212ENST00000543239 A0A075B6Q4 140 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 HSPA12AO43301 675 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 AIREO43918 545 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 DIRAS3O95661 229 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 CLEC2LP0C7M8 214 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
CIT-212ENST00000543239 SNRPBP14678 240 aaKnown RBP12.92□□□□□ -0.34
CIT-212ENST00000543239 CEACAM6P40199 344 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 SERPINB10P48595 397 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 LSAMPQ13449 338 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 SRSF7Q16629 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
CIT-212ENST00000543239 OR8H1Q8NGG4 311 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 MMP27Q9H306 513 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 OR1A1Q9P1Q5 309 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
CIT-212ENST00000543239 IGKV1-6A0A0C4DH72 117 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 RAB29O14966 203 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 FABP7O15540 132 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 ARFRP1Q13795 201 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 Q6ZS49 121 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 CROCCP3Q8IVE0 287 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 C11orf44Q8N8P7 122 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 S1PR3Q99500 378 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 NABP2Q9BQ15 211 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 AGMATQ9BSE5 352 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 CABLES2Q9BTV7 478 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
CIT-212ENST00000543239 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms