RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PAK5Q9P286 719 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 METTL1Q9UBP6 276 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 MMACHCQ9Y4U1 282 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SPEGQ15772 3267 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SPTA1P02549 2419 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 PLXNA3P51805 1871 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ITPR1Q14643 2758 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF462Q96JM2 2506 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ANKRD17O75179 2603 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 PHIPQ8WWQ0 1821 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 MYO9AB2RTY4 2548 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 KMT2EQ8IZD2 1858 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 LOXHD1Q8IVV2 1947 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 A0A1W2PP18 115 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC5A10A0PJK1 596 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ZFP92A6NM28 416 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 CLDN24A6NM45 220 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 OR2AT4A6NND4 320 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 KRTAP16-1A8MUX0 517 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 LOC730098B7Z3J9 87 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 LINC01619G3V211 115 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 FADS1O60427 444 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ADAP1O75689 374 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GATBO75879 557 aaKnown RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GADD45GO95257 159 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 KLF8O95600 359 aaPredicted RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 CD8AP01732 235 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC35G6P0C7Q6 338 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RCC1P18754 421 aaPredicted RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GADD45AP24522 165 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 PSMB9P28065 219 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 MPIP34949 423 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GGT2P36268 569 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 OR4D2P58180 307 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RAB5BP61020 215 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 PKIAP61925 76 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 PITPNAQ00169 270 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TNFRSF9Q07011 255 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TSPAN31Q12999 210 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 BIKQ13323 160 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RGNQ15493 299 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TRAM1Q15629 374 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF630Q2M218 657 aaPredicted RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 C14orf177Q52M58 125 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RNASE10Q5GAN6 216 aaKnown RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 AVPI1Q5T686 147 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 CYB5R2Q6BCY4 276 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 FBXW12Q6X9E4 464 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 SPNS3Q6ZMD2 512 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM183BPQ6ZVS7 135 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RPS27LQ71UM5 84 aaKnown RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 MRPL52Q86TS9 123 aaKnown RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 PRSS58Q8IYP2 241 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM105Q8N8V8 129 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GPR26Q8NDV2 337 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM161BQ8NDZ6 487 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ATP6V1C2Q8NEY4 427 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 NPBQ8NG41 125 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 OR8G5Q8NG78 346 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 STOML3Q8TAV4 291 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RXFP2Q8WXD0 754 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF488Q96MN9 340 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RDH12Q96NR8 316 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RNF157Q96PX1 679 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 TAAR1Q96RJ0 339 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 VAT1Q99536 393 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 GGACTQ9BVM4 153 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 POTEKPQ9BYX7 375 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 ING2Q9H160 280 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 MFSD1Q9H3U5 465 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 DUSP21Q9H596 190 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 DHX35Q9H5Z1 703 aaKnown RBP2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 RNF122Q9H9V4 155 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 USE1Q9NZ43 259 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 CCDC167Q9P0B6 97 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 MDFICQ9P1T7 246 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 CLEC4EQ9ULY5 219 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 SIGLEC9Q9Y336 463 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 V9GYH0 126 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 DOCK3Q8IZD9 2030 aa2.84□□□□□ -1.95
SFSWAP-211ENST00000542813 COL1A2P08123 1366 aa2.84□□□□□ -1.96
SFSWAP-211ENST00000542813 SIP14410 1827 aa2.84□□□□□ -1.96
SFSWAP-211ENST00000542813 FRYQ5TBA9 3013 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 A0A1B0GX12 115 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 GJE1A6NN92 205 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 EFCAB9A8MZ26 197 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 M0QZ92 97 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 UBFD1O14562 309 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 CDIPTO14735 213 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 UBDO15205 165 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 DLEU1O43261 78 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 NPIPB7O75200 414 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC25A27O95847 323 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 P01737 135 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ADRA2AP08913 450 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RPS3P23396 243 aaKnown RBP eCLIP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 HTR1EP28566 365 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms