RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 EPPINO95925 133 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 CTSEP14091 401 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 UGT2B10P36537 528 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 RPL14P50914 215 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 EMP2P54851 167 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 OR10A3P58181 314 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 RAB31Q13636 194 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 UAP1Q16222 522 aaPredicted RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 MRPL51Q4U2R6 128 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 TRMT12Q53H54 448 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 HENMT1Q5T8I9 393 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 AGTRAPQ6RW13 159 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 GLT6D1Q7Z4J2 308 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 INTS1Q8N201 2190 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 YIPF7Q8N8F6 280 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 OR2Y1Q8NGV0 311 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 ZNF563Q8TA94 476 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 TMBIM1Q969X1 311 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 UPK3BQ9BT76 320 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 TIMM21Q9BVV7 248 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 MND1Q9BWT6 205 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 SPZ1Q9BXG8 430 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 PECRQ9BY49 303 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 GOLPH3Q9H4A6 298 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 METTL17Q9H7H0 456 aaPredicted RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 MAT2BQ9NZL9 334 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 MRM2Q9UI43 246 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 ENPP5Q9UJA9 477 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 SNX12Q9UMY4 172 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 RTTNQ86VV8 2226 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 MALRD1Q5VYJ5 2156 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 HELZ2Q9BYK8 2649 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TRGV2A0A075B6R0 118 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 DHRS12A0PJE2 317 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 C11orf86A6NJI1 115 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 SULT1C2O00338 296 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 UBFD1O14562 309 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TNFAIP8O95379 198 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 CST4P01036 141 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 ADORA1P30542 326 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 LCN1P31025 176 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 CDK9P50750 372 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 PSMD7P51665 324 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 STX3Q13277 289 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 ZBTB6Q15916 424 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TPRXLQ17RH7 258 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 CENPWQ5EE01 88 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TMEM31Q5JXX7 168 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TIMM23BQ5SRD1 257 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 N4BP2L1Q5TBK1 243 aaPredicted RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TTC33Q6PID6 262 aaPredicted RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 C2orf91Q6ZV80 131 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 MRPL52Q86TS9 123 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 ST13P4Q8IZP2 240 aaPredicted RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 ZNF283Q8N7M2 679 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 CCDC112Q8NEF3 446 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 TMEM239Q8WW34 195 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 CCDC127Q96BQ5 260 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 Q9BRP9 147 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 SIKE1Q9BRV8 207 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 MRPL32Q9BYC8 188 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 GTSF1LQ9H1H1 148 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 METTL8Q9H825 291 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 NDUFB11Q9NX14 153 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 STK38LQ9Y2H1 464 aa0.67□□□□□ -2.3
KNTC1-213ENST00000542727 MRPS16Q9Y3D3 137 aaKnown RBP0.67□□□□□ -2.3
KNTC1-213ENST00000542727 FLG2Q5D862 2391 aaPredicted RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 RFPL4AA6NLU0 287 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 RFPL4AL1F8VTS6 287 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 ZW10O43264 779 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 SGCEO43556 437 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 ASS1P00966 412 aaKnown RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 IGHV3-30-3P0DP02 117 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 CRHBPP24387 322 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 SERPINB10P48595 397 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 PSMB3P49720 205 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 RAP1GDS1P52306 607 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 ERHP84090 104 aaKnown RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 GTF2BQ00403 316 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 XKRXQ6PP77 449 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 LRRC28Q86X40 367 aaPredicted RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 DEFB119Q8N690 84 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 TMEM75Q8N9X5 138 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 ACBD4Q8NC06 268 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 OR4P4Q8NGL7 312 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 ANGPTL6Q8NI99 470 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 CCDC12Q8WUD4 166 aaPredicted RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 TAMM41Q96BW9 452 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 CCDC124Q96CT7 223 aaKnown RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 MSANTD3Q96H12 275 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 TRNT1Q96Q11 434 aaKnown RBP0.66□□□□□ -2.3
KNTC1-213ENST00000542727 MIEN1Q9BRT3 115 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 CDCA4Q9BXL8 241 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 CHST5Q9GZS9 411 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 COMMD9Q9P000 198 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 TMEM216Q9P0N5 145 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 POFUT2Q9Y2G5 429 aa0.66□□□□□ -2.3
KNTC1-213ENST00000542727 BAZ2BQ9UIF8 2168 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms