RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 A0A1B0GUS0 222 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 KCNMB1Q16558 191 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 UBALD1Q8TB05 177 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 SNRNP40Q96DI7 357 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 PKDREJQ9NTG1 2253 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 IL18BPO95998 194 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 HLA-HP01893 362 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 AMBPP02760 352 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 LHX2P50458 406 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 H3F3AP84243 136 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 CALHM1Q8IU99 346 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 PRR18Q8N4B5 295 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 DOCK11Q5JSL3 2073 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 WNT5AP41221 380 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 PSG4Q00888 419 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 TMEM187Q14656 261 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF695Q8IW36 515 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 KDF1Q8NAX2 398 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 SYT3Q9BQG1 590 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 TRGV5A0A0B4J1U4 118 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 SRP19P09132 144 aaKnown RBP12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 P2RY1P47900 373 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 CLDN18P56856 261 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 Q6ZS92 163 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 LGI3Q8N145 548 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 C12orf49Q9H741 205 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 IL36RNQ9UBH0 155 aa12.22□□□□□ -0.45
SFSWAP-210ENST00000541286 VAMP5O95183 116 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 VAMP2P63027 116 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 TVP23CQ96ET8 276 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 FOXB1Q99853 325 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 PLEKHA2Q9HB19 425 aa12.21□□□□□ -0.45
SFSWAP-210ENST00000541286 COL10A1Q03692 680 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 PMS2P11Q13670 270 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 IGFBP7Q16270 282 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 FAM27BQ5VT28 67 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 MYPOPQ86VE0 399 aaPredicted RBP12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 DTD1Q8TEA8 209 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 TMEM54Q969K7 222 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 SPSB1Q96BD6 273 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 DKK4Q9UBT3 224 aa12.21□□□□□ -0.46
SFSWAP-210ENST00000541286 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 GAPDHP04406 335 aaKnown RBP12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 IZUMO4Q1ZYL8 232 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 FAM185AQ8N0U4 392 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 IL1F10Q8WWZ1 152 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 NDUFAF3Q9BU61 184 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 TRAV39A0A0B4J263 110 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 FGF7P21781 194 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 RAB35Q15286 201 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 C10orf128Q5T292 105 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 TEX38Q6PEX7 206 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 SPSB3Q6PJ21 355 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 CALHM2Q9HA72 323 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 PPIAL4AQ9Y536 164 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 GPR137BO60478 399 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 TFPI2P48307 235 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 GPM6AP51674 278 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 RAC1P63000 192 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 MRPS34P82930 218 aaKnown RBP12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 ICAM4Q14773 271 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 HIKESHIQ53FT3 197 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 RTL6Q6ICC9 239 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 OR4X1Q8NH49 305 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 B4GALT7Q9UBV7 327 aa12.2□□□□□ -0.46
SFSWAP-210ENST00000541286 PPYP01298 95 aa12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 NKX2-1P43699 371 aaPredicted RBP12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 GLIPR1P48060 266 aa12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
SFSWAP-210ENST00000541286 HIST1H2AAQ96QV6 131 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms