RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
CNOT4-212ENST00000541284 PMS2P5A8MQ11 134 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 J3QT63 122 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 OR2H2O95918 312 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 HBE1P02100 147 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 METTL15P1P0C7V9 234 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF766Q5HY98 468 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 TCEAL6Q6IPX3 200 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 P4HA3Q7Z4N8 544 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 CENPVQ7Z7K6 275 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF573Q86YE8 665 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 NEK7Q8TDX7 302 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 APH1AQ96BI3 265 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 SDF2L1Q9HCN8 221 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 PLA2G3Q9NZ20 509 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 GNG13Q9P2W3 67 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 URGCP-MRPS24S4R325 110 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 DOCK7Q96N67 2140 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 OR1C1Q15619 314 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 ALKBH6Q3KRA9 238 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 WDR25Q64LD2 544 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-212ENST00000541284 TMEM14EPQ6UXP3 125 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF610Q8N9Z0 462 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 UBALD1Q8TB05 177 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 NIPSNAP3BQ9BS92 247 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 WDR61Q9GZS3 305 aaKnown RBP8.04□□□□□ -1.12
CNOT4-212ENST00000541284 SMG1Q96Q15 3661 aaKnown RBP8.03□□□□□ -1.12
CNOT4-212ENST00000541284 TRGC2P03986 189 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 CELA3BP08861 270 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 CD200P41217 278 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 CEBPGP53567 150 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 FGF8P55075 233 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-212ENST00000541284 SOX8P57073 446 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 HOXA4Q00056 320 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-212ENST00000541284 SPATA46Q5T0L3 261 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 MDP1Q86V88 176 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 STX12Q86Y82 276 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 DRAM1Q8N682 238 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 MDS2Q8NDY4 140 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 WDYHV1Q96HA8 205 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 ZPBPQ9BS86 351 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 TOLLIPQ9H0E2 274 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 TRAV20A0A0B4J274 112 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 S100PP25815 95 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 CD81P60033 236 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF146Q15072 292 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 SCCPDHQ8NBX0 429 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 FRZBQ92765 325 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 OR4C12Q96R67 309 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 OR51B6Q9H340 312 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 PRDM13Q9H4Q3 707 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 PPP1R3CQ9UQK1 317 aa8.03□□□□□ -1.12
CNOT4-212ENST00000541284 S100A9P06702 114 aaKnown RBP8.02□□□□□ -1.12
CNOT4-212ENST00000541284 PGA5P0DJD9 388 aa8.02□□□□□ -1.12
CNOT4-212ENST00000541284 ERVS71-1P61550 626 aa8.02□□□□□ -1.12
CNOT4-212ENST00000541284 RPP25LQ8N5L8 163 aaKnown RBP8.02□□□□□ -1.12
CNOT4-212ENST00000541284 CDH20Q9HBT6 801 aa8.02□□□□□ -1.12
CNOT4-212ENST00000541284 HES4Q9HCC6 221 aa8.02□□□□□ -1.12
CNOT4-212ENST00000541284 PSENENQ9NZ42 101 aa8.02□□□□□ -1.12
CNOT4-212ENST00000541284 DNAJC13O75165 2243 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 ANKRD30BLA7E2S9 258 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 B4DEV8 164 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 CNOT4O95628 575 aaKnown RBP8.02□□□□□ -1.13
CNOT4-212ENST00000541284 SERPINE2P07093 398 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 MDKP21741 143 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-212ENST00000541284 MDH2P40926 338 aaKnown RBP8.02□□□□□ -1.13
CNOT4-212ENST00000541284 NDUFA6P56556 154 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 RPL30P62888 115 aaKnown RBP8.02□□□□□ -1.13
CNOT4-212ENST00000541284 RNFT1Q5M7Z0 435 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 Q8N7P7 452 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 OR13D1Q8NGV5 346 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 IL1F10Q8WWZ1 152 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 DMRT1Q9Y5R6 373 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 SIRPB1O00241 398 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 LAMTOR5O43504 91 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 RAMP3O60896 148 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 SYNGR4O95473 234 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 CD55P08174 381 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 ACSM6Q6P461 480 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 BEND4Q6ZU67 534 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 SPRR3Q9UBC9 169 aa8.02□□□□□ -1.13
CNOT4-212ENST00000541284 CYB5BO43169 146 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 PSPNO60542 156 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 SMPD2O60906 423 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 CYB5R3P00387 301 aaPredicted RBP8.01□□□□□ -1.13
CNOT4-212ENST00000541284 RAB11AP62491 216 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 ZNF674Q2M3X9 581 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 TMEM41BQ5BJD5 291 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 DCAF10Q5QP82 559 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 Q6ZR03 302 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 MOB1BQ7L9L4 216 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 C11orf53Q8IXP5 236 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 PYGO2Q9BRQ0 406 aa8.01□□□□□ -1.13
CNOT4-212ENST00000541284 TMEM9BQ9NQ34 198 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms