RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SLC35E4Q6ICL7 350 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 OSR2Q8N2R0 312 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF485Q8NCK3 441 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 OR4C13Q8NGP0 309 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 OR2T6Q8NHC8 308 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 LINC01006Q8NI28 216 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 CAPSLQ8WWF8 208 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 FAM192AQ9GZU8 254 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 LINC00574Q9H8X3 128 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 ISYNA1Q9NPH2 558 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 FKBP14Q9NWM8 211 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 TAS2R4Q9NYW5 299 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 CLEC2DQ9UHP7 191 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 BLOC1S6Q9UL45 172 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 ST3GAL6Q9Y274 331 aa4.59□□□□□ -1.67
SUDS3-202ENST00000541280 AMMECR1Q9Y4X0 333 aaPredicted RBP4.59□□□□□ -1.67
SUDS3-202ENST00000541280 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.68
SUDS3-202ENST00000541280 MEIKINA0A087WXM9 373 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 IGHV2-26A0A0B4J1V2 119 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 PTGES3LE9PB15 166 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 H3BUX3 64 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 M0QZK8 103 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 SIRPB1O00241 398 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 ORC5O43913 435 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 MRPS14O60783 128 aaKnown RBP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 FAM106CPP0CH98 169 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 MYF6P23409 242 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 CDK2P24941 298 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 MNDAP41218 407 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 GLIPR1P48060 266 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 RPS11P62280 158 aaKnown RBP eCLIP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 EMX1Q04741 257 aaPredicted RBP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 AESQ08117 197 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 FAM189A2Q15884 450 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 SSX2Q16385 188 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 TRAT1Q6PIZ9 186 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 UNQ9370/PRO34162Q6UXP9 181 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 AHSA2Q719I0 299 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF554Q86TJ5 538 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 BATF2Q8N1L9 274 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 Q8N2B8 174 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 ZBTB8BQ8NAP8 495 aaPredicted RBP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 OR52M1Q8NGK5 317 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 OR5D18Q8NGL1 313 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 OR9G1Q8NH87 305 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 NDNFQ8TB73 568 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 RFT1Q96AA3 541 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 PGLYRP3Q96LB9 341 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 SPACA5Q96QH8 159 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 NR1H4Q96RI1 486 aaPredicted RBP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF184Q99676 751 aaPredicted RBP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 CITED1Q99966 193 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 CHST6Q9GZX3 395 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 CST11Q9H112 138 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 PPA2Q9H2U2 334 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 TCF19Q9Y242 345 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.58□□□□□ -1.68
SUDS3-202ENST00000541280 SVEP1Q4LDE5 3571 aa4.58□□□□□ -1.68
SUDS3-202ENST00000541280 TRAV24A0A0B4J272 114 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 TMEM30CPA0ZSE6 113 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 A6NDX4 124 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 BUB1B-PAK6H3BSN5 160 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 CCRL2O00421 344 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 XPNPEP2O43895 674 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 PEX14O75381 377 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 ARL6IP5O75915 188 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 OR7C1O76099 320 aaPredicted RBP4.57□□□□□ -1.68
SUDS3-202ENST00000541280 IL1AP01583 271 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 IGLV1-47P01700 117 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 GNAO1P09471 354 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 CGB3P0DN86 165 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 CGB7P0DN87 165 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 CALCBP10092 127 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 CD37P11049 281 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 LYL1P12980 280 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 SRMP19623 302 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 OMGP23515 440 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 RAB7AP51149 207 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 SNU13P55769 128 aaKnown RBP4.57□□□□□ -1.68
SUDS3-202ENST00000541280 RBM11P57052 281 aaKnown RBP4.57□□□□□ -1.68
SUDS3-202ENST00000541280 SLC35A2P78381 396 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 TPBGQ13641 420 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 HERPUD1Q15011 391 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 SLC22A6Q4U2R8 563 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 ACSM3Q53FZ2 586 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 RBM48Q5RL73 367 aaKnown RBP4.57□□□□□ -1.68
SUDS3-202ENST00000541280 C6orf183Q5T699 404 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 TMEM268Q5VZI3 342 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 XAF1Q6GPH4 301 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 LAIR2Q6ISS4 152 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 GLIPR1L1Q6UWM5 242 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 PRSS48Q7RTY5 328 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 ZNF329Q86UD4 541 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 JAGN1Q8N5M9 183 aa4.57□□□□□ -1.68
SUDS3-202ENST00000541280 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms