RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 EFCAB9A8MZ26 197 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 FTCDNL1E5RQL4 147 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 K7EN84 100 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 K7ERU9 68 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 PDE6DO43924 150 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 HSBP1O75506 76 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR2B3O76000 313 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 C6orf47O95873 294 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 SERPINA7P05543 415 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 BCHEP06276 602 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 MRPL3P09001 348 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 CSF3P09919 207 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 C8orf88P0DMB2 117 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 HIST1H1EP10412 219 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 CD37P11049 281 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 GPX2P18283 190 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 CELP19835 753 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 RPS12P25398 132 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 PSMA1P25786 263 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 HMGB2P26583 209 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 GGT2P36268 569 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 RAB10P61026 200 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 RHOAP61586 193 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 GNG3P63215 75 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 MAD2L1BPQ15013 274 aaPredicted RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 TAF9Q16594 264 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 ARHGAP11BQ3KRB8 267 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 CARD16Q5EG05 197 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 CLLU1Q5K131 121 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 ANKRD22Q5VYY1 191 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 ASCL5Q7RTU5 278 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 BAP18Q8IXM2 172 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 NOXO1Q8NFA2 376 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR4D5Q8NGN0 318 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR1P1Q8NH06 330 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR4C6Q8NH72 309 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 OR1F12Q8NHA8 337 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 TERB2Q8NHR7 220 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 UBALD1Q8TB05 177 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 BAALCQ8WXS3 180 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 RORBQ92753 470 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 RPEQ96AT9 228 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 APH1AQ96BI3 265 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 PYURFQ96I23 114 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 TBX5Q99593 518 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 KCTD14Q9BQ13 255 aaPredicted RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 MS4A8Q9BY19 250 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 SLIRPQ9GZT3 109 aaKnown RBP3.26□□□□□ -1.89
YBX3-210ENST00000540975 ARL6Q9H0F7 186 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 DSN1Q9H410 356 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 FAM96AQ9H5X1 160 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 ISYNA1Q9NPH2 558 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 CLN6Q9NWW5 311 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 JPT1Q9UK76 154 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 PSG8Q9UQ74 426 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 SLC17A4Q9Y2C5 497 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 TNS3Q68CZ2 1445 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 DOCK2Q92608 1830 aa3.26□□□□□ -1.89
YBX3-210ENST00000540975 SIPA1L3O60292 1781 aaPredicted RBP3.25□□□□□ -1.89
YBX3-210ENST00000540975 MYH3P11055 1940 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 A0A1W2PPV9 198 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 CCDC182A6NF36 153 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 ZNF878C9JN71 531 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 F6UZH7 168 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 FAAHO00519 579 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 CHST1O43916 411 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 CDC40O60508 579 aaKnown RBP eCLIP3.25□□□□□ -1.89
YBX3-210ENST00000540975 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 HLA-AP01891 365 aaKnown RBP3.25□□□□□ -1.89
YBX3-210ENST00000540975 CD74P04233 296 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 KLK1P06870 262 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 HIST1H1CP16403 213 aaKnown RBP3.25□□□□□ -1.89
YBX3-210ENST00000540975 ZNF43P17038 809 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 KITLGP21583 273 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 CD1CP29017 333 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 GPR1P46091 355 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 GABARAPL2P60520 117 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 RAB5BP61020 215 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 UBE2MP61081 183 aaKnown RBP3.25□□□□□ -1.89
YBX3-210ENST00000540975 TBPL1P62380 186 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 PPP3R1P63098 170 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 PRKCDQ05655 676 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 SPIN4Q56A73 249 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 OCIAD2Q56VL3 154 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 NCMAPQ5T1S8 102 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 AVPI1Q5T686 147 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 HENMT1Q5T8I9 393 aaKnown RBP3.25□□□□□ -1.89
YBX3-210ENST00000540975 C22orf42Q6IC83 251 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 TEX261Q6UWH6 196 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 TMPPEQ6ZT21 453 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 SSX6Q7RTT6 188 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 OR2W3Q7Z3T1 314 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 APRG1Q8IVJ8 170 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 DEFB107AQ8IZN7 70 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 OR56A4Q8NGH8 313 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 OR5J2Q8NH18 312 aa3.25□□□□□ -1.89
YBX3-210ENST00000540975 RIOK2Q9BVS4 552 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms