RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 LGI3Q8N145 548 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF808Q8N4W9 903 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 OR52M1Q8NGK5 317 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LEAP2Q969E1 77 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 VRK1Q99986 396 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 TOLLIPQ9H0E2 274 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF665Q9H7R5 613 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 COMMD9Q9P000 198 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 PAIP2BQ9ULR5 123 aaKnown RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LRBAP50851 2863 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 DCHS2Q6V1P9 2916 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 PPIAL4EA0A075B759 164 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 MSGN1A6NI15 193 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 PPIAL4DF5H284 164 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 ST8SIA5O15466 376 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 MMP23AO75900 390 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 SOD3P08294 240 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 PPIAL4FP0DN26 164 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 RPA2P15927 270 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 F2RP25116 425 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 UCP1P25874 307 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 LOXL3P58215 753 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 RPL30P62888 115 aaKnown RBP10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM65Q6PI78 240 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 SLC7A5P1Q8MH63 180 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 C14orf79Q96F83 325 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 ABHD14BQ96IU4 210 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM56Q96MV1 263 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 OR2D2Q9H210 308 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 MS4A5Q9H3V2 200 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 OR2S2Q9NQN1 319 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 CALYQ9NYX4 217 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 UBE2J1Q9Y385 318 aaPredicted RBP10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 PPIAL4AQ9Y536 164 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM56-RWDD3S4R434 201 aa10.16□□□□□ -0.78
AP003559.1-201ENST00000540906 IGHV1-69-2A0A0G2JMI3 117 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 LRRC30A6NM36 301 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 H0Y980 276 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 TMPRSS2O15393 492 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 SLC31A2O15432 143 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF134P52741 427 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF585BQ52M93 769 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 C11orf71Q6IPW1 123 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 BTNL3Q6UXE8 466 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 OR8H1Q8NGG4 311 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 OR1S1Q8NH92 325 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 PPP1R35Q8TAP8 253 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 ARL6Q9H0F7 186 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 RBM7Q9Y580 266 aaKnown RBP10.15□□□□□ -0.78
AP003559.1-201ENST00000540906 PROP1O75360 226 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 CDS2O95674 445 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 LYL1P12980 280 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 S100A11P31949 105 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 S100A10P60903 97 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 FGL1Q08830 312 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF273Q14593 569 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 IZUMO4Q1ZYL8 232 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 PCNPQ8WW12 178 aaKnown RBP10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 RBMXL1Q96E39 390 aaKnown RBP10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 AGMATQ9BSE5 352 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 PSG11Q9UQ72 335 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 U3KQ87 197 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 TRAV38-1A0A0B4J264 116 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 F2RL2O00254 374 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 SPINT2O43291 252 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 MBPP02686 304 aaPredicted RBP10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 NDUFB7P17568 137 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 HTD2P86397 168 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF680Q8NEM1 530 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 OR5D13Q8NGL4 314 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 THAP6Q8TBB0 222 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 DCUN1D4Q92564 292 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 FAM234AQ9H0X4 552 aa10.14□□□□□ -0.79
AP003559.1-201ENST00000540906 ADAM20O43506 726 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 SCGB1D2O95969 90 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 IFNA21P01568 189 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF16P17020 682 aaPredicted RBP10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 GZMHP20718 246 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 CYCSP99999 105 aaKnown RBP10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 MORN2Q502X0 79 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 OR2B11Q5JQS5 317 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 PRSS54Q6PEW0 395 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 TRAT1Q6PIZ9 186 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF695Q8IW36 515 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 KCNRGQ8N5I3 272 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF645Q8N7E2 425 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 OR4D5Q8NGN0 318 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms