RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-209ENST00000540804 ACTBP60709 375 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
MSRB3-209ENST00000540804 KIR2DS1Q14954 304 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 MED22Q15528 200 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 HMGN3Q15651 99 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 VAX1Q5SQQ9 334 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 C1orf100Q5SVJ3 147 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 OR8H1Q8NGG4 311 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 TMEM203Q969S6 136 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 OR5B12Q96R08 314 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 HDHD3Q9BSH5 251 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-209ENST00000540804 MND1Q9BWT6 205 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 CST11Q9H112 138 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 RAB9BQ9NP90 201 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 GHRLQ9UBU3 117 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 SOCS1O15524 211 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
MSRB3-209ENST00000540804 YPEL1O60688 119 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 IGF1P05019 195 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 ELANEP08246 267 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 SRMP19623 302 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 PSMB8P28062 276 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 SLC6A1P30531 599 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 QRFPP83859 136 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 HTD2P86397 168 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 CD69Q07108 199 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 KIAA0141Q14154 515 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-209ENST00000540804 P2RY14Q15391 338 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 SPHARQ15513 63 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 HSD17B12Q53GQ0 312 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 GLDNQ6ZMI3 551 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-209ENST00000540804 ZNF833PQ6ZTB9 187 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 OR8U1Q8NH10 309 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 NRG4Q8WWG1 115 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 GALMQ96C23 342 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 PRR25Q96S07 402 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
MSRB3-209ENST00000540804 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 RYR3Q15413 4870 aa11.29□□□□□ -0.6
MSRB3-209ENST00000540804 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 SLC22A1O15245 554 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 UCHL1P09936 223 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 UBBP0CG47 229 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 BLVRBP30043 206 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-209ENST00000540804 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
MSRB3-209ENST00000540804 AQP4P55087 323 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 RPS25P62851 125 aaKnown RBP11.28□□□□□ -0.6
MSRB3-209ENST00000540804 DGCR2P98153 550 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 IRF3Q14653 427 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 GLT8D1Q68CQ7 371 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 FAM131AQ6UXB0 335 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 TMEM91Q6ZNR0 172 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 MS4A15Q8N5U1 240 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-209ENST00000540804 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
MSRB3-209ENST00000540804 NBR2O15453 112 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 NAPSAO96009 420 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 GNB1P62873 340 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 NDPQ00604 133 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 PLA2G7Q13093 441 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 OR2AK2Q8NG84 335 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 PHYHIPQ92561 330 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 THRSPQ92748 146 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.61
MSRB3-209ENST00000540804 OR51J1Q9H342 316 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 AK3Q9UIJ7 227 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
MSRB3-209ENST00000540804 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms