RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 TMEM65Q6PI78 240 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 ODF3L1Q8IXM7 274 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 RITA1Q96K30 269 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 UBE2E2Q96LR5 201 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 UQCC2Q9BRT2 126 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 OR51J1Q9H342 316 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 PARP11Q9NR21 331 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 VSIG4Q9Y279 399 aa11□□□□□ -0.65
SNHG1-213ENST00000540725 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
SNHG1-213ENST00000540725 HUWE1Q7Z6Z7 4374 aaKnown RBP10.99□□□□□ -0.65
SNHG1-213ENST00000540725 IGHV7-81A0A0B4J1V7 117 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 I3L521 148 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 NBR2O15453 112 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 YPEL1O60688 119 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 RGS11O94810 467 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 CD1AP06126 327 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 OR8U8P0C7N1 319 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 OR3A3P47888 321 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 HTD2P86397 168 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 RUNX1Q01196 453 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 ZNF616Q08AN1 781 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 C5orf64Q2M2E5 130 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 C6orf141Q5SZD1 244 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 DHRSXQ8N5I4 330 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 THRSPQ92748 146 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 YPEL2Q96QA6 119 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 ANKRD60Q9BZ19 345 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 CST11Q9H112 138 aa10.99□□□□□ -0.65
SNHG1-213ENST00000540725 CNOT2Q9NZN8 540 aaKnown RBP10.99□□□□□ -0.65
SNHG1-213ENST00000540725 DNAH7Q8WXX0 4024 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 MYL12BO14950 172 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 LY86O95711 162 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-213ENST00000540725 MAPK3P27361 379 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-213ENST00000540725 CHATP28329 748 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 BLVRBP30043 206 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-213ENST00000540725 INSL3P51460 131 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 WNT4P56705 351 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 GNB1P62873 340 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 PACRGLQ8N7B6 248 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 OR2AK2Q8NG84 335 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 GALMQ96C23 342 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 NEDD4LQ96PU5 975 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 ASCL2Q99929 193 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 SULT4A1Q9BR01 284 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 KIAA1456Q9P272 454 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 GHRLQ9UBU3 117 aa10.98□□□□□ -0.65
SNHG1-213ENST00000540725 NDUFA3O95167 84 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 UBBP0CG47 229 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 RAB9AP51151 201 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 HMGN3Q15651 99 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 LAIR2Q6ISS4 152 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 LIN54Q6MZP7 749 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 AHSA2Q719I0 299 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 NPBQ8NG41 125 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 PSORS1C1Q9UIG5 152 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 LRRC42Q9Y546 428 aa10.97□□□□□ -0.65
SNHG1-213ENST00000540725 GNAO1P09471 354 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 NDPQ00604 133 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 INSL4Q14641 139 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 OR10K2Q6IF99 312 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 FAM131AQ6UXB0 335 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 C8orf59Q8N0T1 100 aaPredicted RBP10.96□□□□□ -0.65
SNHG1-213ENST00000540725 MINDY2Q8NBR6 621 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 IL1F10Q8WWZ1 152 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 DCUN1D4Q92564 292 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 FAAP24Q9BTP7 215 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 ABRACLQ9P1F3 81 aa10.96□□□□□ -0.65
SNHG1-213ENST00000540725 OVOL1O14753 267 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 ST8SIA5O15466 376 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 RPS27AP62979 156 aaKnown RBP10.95□□□□□ -0.66
SNHG1-213ENST00000540725 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 FAM27D1Q5T7N8 215 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 C6orf201Q7Z4U5 140 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 SVOPQ8N4V2 548 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 NANOGP1Q8N7R0 232 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 TMEM59Q9BXS4 323 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
SNHG1-213ENST00000540725 PLCXD1Q9NUJ7 323 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 STEAP1Q9UHE8 339 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 ERGIC3Q9Y282 383 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
SNHG1-213ENST00000540725 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms