RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 LIMS4P0CW20 117 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 CD36P16671 472 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 F8A1P23610 371 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 GRPRP30550 384 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 GABRA3P34903 492 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 RCVRNP35243 200 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 CRATP43155 626 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 LPAR6P43657 344 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 SULT1A2P50226 295 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 CD164Q04900 197 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 DNAL1Q4LDG9 190 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 PLEKHG7Q6ZR37 379 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 Q6ZT83 130 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 CLEC20AQ6ZU45 233 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 MRPL52Q86TS9 123 aaKnown RBP0.89□□□□□ -2.27
MDM2-227ENST00000540709 SPATA24Q86W54 205 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 CD302Q8IX05 232 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 ACBD4Q8NC06 268 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 OR7G1Q8NGA0 311 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 FAM45AQ8TCE6 357 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 MRPS24Q96EL2 167 aaKnown RBP0.89□□□□□ -2.27
MDM2-227ENST00000540709 ZNF514Q96K75 400 aaPredicted RBP0.89□□□□□ -2.27
MDM2-227ENST00000540709 TMEM56Q96MV1 263 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 HDHD2Q9H0R4 259 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 SMDT1Q9H4I9 107 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 METTL17Q9H7H0 456 aaPredicted RBP0.89□□□□□ -2.27
MDM2-227ENST00000540709 ASCL3Q9NQ33 180 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 DMAC2Q9NW81 257 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 NDUFB11Q9NX14 153 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 COMMD9Q9P000 198 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 SCML1Q9UN30 329 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 V9GYY5 206 aaPredicted RBP0.89□□□□□ -2.27
MDM2-227ENST00000540709 LCTP09848 1927 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 PTPRJQ12913 1337 aa0.89□□□□□ -2.27
MDM2-227ENST00000540709 IGLV3-9A0A075B6K5 115 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 IGKV1D-43A0A0B4J1Z2 117 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 A0A1B0GX12 115 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 C9J4A7 227 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 MKRN2OSH3BPM6 223 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 K7EQS6 105 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 LIN7AO14910 233 aaPredicted RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 CRXO43186 299 aaPredicted RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 LTAP01374 205 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 FBP1P09467 338 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 UGT2B7P16662 529 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 TSPOP30536 169 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 ADORA1P30542 326 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 ANP32AP39687 249 aaKnown RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 OR10A3P58181 314 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 SLAMF1Q13291 335 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 ITGB3BPQ13352 177 aaPredicted RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 TMEM249Q2WGJ8 235 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 TTC33Q6PID6 262 aaPredicted RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 XKRXQ6PP77 449 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 FAM151BQ6UXP7 276 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 FAM19A1Q7Z5A9 133 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 SLC13A5Q86YT5 568 aaPredicted RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 BLIDQ8IZY5 108 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 LFNGQ8NES3 379 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 OR2Y1Q8NGV0 311 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 OR5AK3PQ8NH89 298 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 SUN5Q8TC36 379 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 DYNC2LI1Q8TCX1 351 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 RORBQ92753 470 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 ARL5BQ96KC2 179 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 FAM210AQ96ND0 272 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 TMEM208Q9BTX3 173 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 EBPLQ9BY08 206 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 POTEKPQ9BYX7 375 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 METTL8Q9H825 291 aaKnown RBP0.88□□□□□ -2.27
MDM2-227ENST00000540709 EURLQ9NYK6 297 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 NKIRAS1Q9NYS0 192 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.88□□□□□ -2.27
MDM2-227ENST00000540709 MINOS1-NBL1R4GNA1 71 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 RTEL1-TNFRSF6BF6WH68 1400 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 CRB1P82279 1406 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 COL18A1P39060 1754 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 CR1P17927 2039 aa0.88□□□□□ -2.27
MDM2-227ENST00000540709 PXDNLA1KZ92 1463 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 A0A0A6YYH2 397 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 DAPL1A0PJW8 107 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 A6NJ64 397 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 METTL15A6NJ78 407 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 GOLGA8KD6RF30 607 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 GOLGA8MH3BSY2 632 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 J3QLI3 93 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 GPR171O14626 319 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 ITGB1BP1O14713 200 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 TOX3O15405 576 aaPredicted RBP0.87□□□□□ -2.27
MDM2-227ENST00000540709 ZW10O43264 779 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 FGF16O43320 207 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 COCHO43405 550 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 ATP8B1O43520 1251 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 PSMB6P28072 239 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 CDC34P49427 236 aaPredicted RBP0.87□□□□□ -2.27
MDM2-227ENST00000540709 BLVRAP53004 296 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 DLX6P56179 175 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 MP68P56378 58 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 GABARAPL2P60520 117 aa0.87□□□□□ -2.27
MDM2-227ENST00000540709 RAB2AP61019 212 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms