RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 P2RY14Q15391 338 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 IZUMO2Q6UXV1 221 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 OR2W3Q7Z3T1 314 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 YPEL2Q96QA6 119 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 MGLLQ99685 303 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 ABHD14AQ9BUJ0 271 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 AURKAIP1Q9NWT8 199 aaPredicted RBP13.19□□□□□ -0.3
DDB1-215ENST00000539712 OR3A3P47888 321 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 TMEM50BP56557 158 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 CFHR3Q02985 330 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 REC114Q7Z4M0 266 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 MRPL41Q8IXM3 137 aaKnown RBP13.18□□□□□ -0.3
DDB1-215ENST00000539712 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 GALMQ96C23 342 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 NABP2Q9BQ15 211 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 IFI27L2Q9H2X8 130 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 LRRC42Q9Y546 428 aa13.18□□□□□ -0.3
DDB1-215ENST00000539712 TRBV6-6A0A0A6YYG2 114 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 AP4M1O00189 453 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 LDLRAD4O15165 306 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 PF4P02776 101 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 THBS3P49746 956 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 TRAM1Q15629 374 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 SSX1Q16384 188 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 ZNF251Q9BRH9 671 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 HDHD3Q9BSH5 251 aaPredicted RBP13.17□□□□□ -0.3
DDB1-215ENST00000539712 MRPL20Q9BYC9 149 aaKnown RBP13.17□□□□□ -0.3
DDB1-215ENST00000539712 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
DDB1-215ENST00000539712 ZFP57Q9NU63 452 aa13.17□□□□□ -0.3
DDB1-215ENST00000539712 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 ARSBP15848 533 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 PSMA1P25786 263 aaKnown RBP13.16□□□□□ -0.3
DDB1-215ENST00000539712 CLDN12P56749 244 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 KRTAP10-11P60412 298 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 CNBD2Q96M20 576 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 PLEKHJ1Q9NW61 149 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 AK3Q9UIJ7 227 aa13.16□□□□□ -0.3
DDB1-215ENST00000539712 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 ARL6IP5O75915 188 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
DDB1-215ENST00000539712 SAA2P0DJI9 122 aaPredicted RBP13.15□□□□□ -0.3
DDB1-215ENST00000539712 CNTFRP26992 372 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.3
DDB1-215ENST00000539712 SLC35B1P78383 322 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 TBCEQ15813 527 aaPredicted RBP13.15□□□□□ -0.3
DDB1-215ENST00000539712 RAB11BQ15907 218 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 OR51D1Q8NGF3 324 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
DDB1-215ENST00000539712 P2RX4Q99571 388 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 AGMATQ9BSE5 352 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 VCX3BQ9H321 246 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 HSF4Q9ULV5 492 aa13.15□□□□□ -0.3
DDB1-215ENST00000539712 ERICH4A6NGS2 130 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 PROP1O75360 226 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 RGS11O94810 467 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 IGF1P05019 195 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 SOX6P35712 828 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 HSPA13P48723 471 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 ACTBP60709 375 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 C2orf76Q3KRA6 126 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 PLAC9Q5JTB6 97 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 TEX38Q6PEX7 206 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 CD200R1LQ6Q8B3 271 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 OR2AK2Q8NG84 335 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 IL1F10Q8WWZ1 152 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 FAM3DQ96BQ1 224 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 ARHGAP5-AS1Q96IT6 56 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
DDB1-215ENST00000539712 RIMS4Q9H426 269 aaPredicted RBP13.14□□□□□ -0.31
DDB1-215ENST00000539712 ACOT13Q9NPJ3 140 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 ABRACLQ9P1F3 81 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
DDB1-215ENST00000539712 ZNF580Q9UK33 172 aa13.14□□□□□ -0.31
DDB1-215ENST00000539712 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 IGHG4P01861 327 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 SLC2A2P11168 524 aaPredicted RBP13.13□□□□□ -0.31
DDB1-215ENST00000539712 SLC6A1P30531 599 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 VEGFCP49767 419 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 FOXE3Q13461 319 aa13.13□□□□□ -0.31
DDB1-215ENST00000539712 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms