RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 LCNL1Q6ZST4 164 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ODF3L1Q8IXM7 274 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 COMMD1Q8N668 190 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SETD6Q8TBK2 473 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 IL1F10Q8WWZ1 152 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 MRPL20Q9BYC9 149 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 PLGRKTQ9HBL7 147 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ZFP57Q9NU63 452 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 PLEKHJ1Q9NW61 149 aa15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 AK6Q9Y3D8 172 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-212ENST00000539372 YPEL1O60688 119 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SLC2A2P11168 524 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CRHBPP24387 322 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 OR3A3P47888 321 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 THBS3P49746 956 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 TEX38Q6PEX7 206 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SVOPQ8N4V2 548 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 FAM71E2Q8N5Q1 922 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 OR8H1Q8NGG4 311 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 DUX3Q96PT4 197 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 YPEL2Q96QA6 119 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ABRACLQ9P1F3 81 aa14.99□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SOCS1O15524 211 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 RGS11O94810 467 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 RPLP1P05386 114 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ARSBP15848 533 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CPEP16870 476 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SOX6P35712 828 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 MLLT11Q13015 90 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 MMDQ15546 238 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 PNLIPRP3Q17RR3 467 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 OR2AK2Q8NG84 335 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 RITA1Q96K30 269 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 HDHD3Q9BSH5 251 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 LPAR5Q9H1C0 372 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ISYNA1Q9NPH2 558 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 LRRC42Q9Y546 428 aa14.98□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SAA2-SAA4A0A096LPE2 208 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SLC17A2O00624 439 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ST8SIA5O15466 376 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 RRP9O43818 475 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 NAPSAO96009 420 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 SAA2P0DJI9 122 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CNTFRP26992 372 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 HOXD3P31249 432 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 KRTAP10-11P60412 298 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 FABP5Q01469 135 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 TRAM1Q15629 374 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 RAB11BQ15907 218 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 IZUMO2Q6UXV1 221 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 PRSS48Q7RTY5 328 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ZNF695Q8IW36 515 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CNBD2Q96M20 576 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 MGLLQ99685 303 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 NABP2Q9BQ15 211 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 URM1Q9BTM9 101 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 GON7Q9BXV9 100 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 IFI27L2Q9H2X8 130 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 VCX3BQ9H321 246 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 STEAP1Q9UHE8 339 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 AK3Q9UIJ7 227 aa14.97□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ERICH4A6NGS2 130 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ARL6IP5O75915 188 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 DUS4LO95620 317 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 VDAC1P21796 283 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CALRP27797 417 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CLDN12P56749 244 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ACTBP60709 375 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 CXorf66Q5JRM2 361 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 LY6G6FQ5SQ64 297 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ZNF880Q6PDB4 577 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ZNF833PQ6ZTB9 187 aa14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 ZNF107Q9UII5 783 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-212ENST00000539372 PSMA1P25786 263 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 SLC6A1P30531 599 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 MYCNOSP40205 109 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 FOXE3Q13461 319 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 DEFB136Q30KP8 78 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 RAX2Q96IS3 184 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 P2RX4Q99571 388 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 ZNF251Q9BRH9 671 aa14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 PARP12Q9H0J9 701 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-212ENST00000539372 K7EIL1 84 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 VEGFCP49767 419 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 RAB25P57735 213 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 CFHR3Q02985 330 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 RPL39P5Q59GN2 51 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 MOB1BQ7L9L4 216 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 FAM89BQ8N5H3 189 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 KCTD7Q96MP8 289 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 SLC23A1Q9UHI7 598 aa14.94□□□□□ -0.02
TNFRSF1A-212ENST00000539372 TRBV6-6A0A0A6YYG2 114 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 WI2-2373I1.2A0A1W2PRP0 233 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 FOXI3A8MTJ6 420 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 CCL24O00175 119 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 ELANEP08246 267 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 HSPA13P48723 471 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 PLA2G7Q13093 441 aa14.93□□□□□ -0.02
TNFRSF1A-212ENST00000539372 FAM3DQ96BQ1 224 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms