RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 IGHV3-72A0A0B4J1Y9 119 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 AP4M1O00189 453 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 ATP6V1G2O95670 118 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 BEAN1Q3B7T3 259 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 ZNF880Q6PDB4 577 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 SVOPQ8N4V2 548 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 OR2AK2Q8NG84 335 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 OR52L2PQ8NGH6 319 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 NICN1Q9BSH3 213 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 YTHDF1Q9BYJ9 559 aaKnown RBP16.99■□□□□ 0.31
CCDC78-215ENST00000538176 PIPOXQ9P0Z9 390 aa16.99■□□□□ 0.31
CCDC78-215ENST00000538176 TRAV1-2A0A0B4J238 106 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 G3V4G9 280 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 CD33P20138 364 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 FAM53AQ6NSI3 398 aaPredicted RBP16.98■□□□□ 0.31
CCDC78-215ENST00000538176 FAM71F2Q6NXP2 309 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 C1QL4Q86Z23 238 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 Q8N9W7 124 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 OR51D1Q8NGF3 324 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 OR56B1Q8NGI3 324 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 FAM3DQ96BQ1 224 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 S1PR3Q99500 378 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 PLSCR3Q9NRY6 295 aa16.98■□□□□ 0.31
CCDC78-215ENST00000538176 A0A1W2PRX2 142 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 ITGB1BP1O14713 200 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 RRP9O43818 475 aaKnown RBP16.97■□□□□ 0.31
CCDC78-215ENST00000538176 DUS4LO95620 317 aaKnown RBP16.97■□□□□ 0.31
CCDC78-215ENST00000538176 PF4P02776 101 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 PPP1CCP36873 323 aaKnown RBP16.97■□□□□ 0.31
CCDC78-215ENST00000538176 P2RY14Q15391 338 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 C2orf76Q3KRA6 126 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 TEX38Q6PEX7 206 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 CD200R1LQ6Q8B3 271 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 STPG2Q8N412 459 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 GFI1Q99684 422 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 CHCHD6Q9BRQ6 235 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 NDUFB11Q9NX14 153 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 RAB22AQ9UL26 194 aa16.97■□□□□ 0.31
CCDC78-215ENST00000538176 TRDV1A0A1B0GX56 115 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 RAB29O14966 203 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 SOCS1O15524 211 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 DENRO43583 198 aaKnown RBP16.96■□□□□ 0.31
CCDC78-215ENST00000538176 MYL9P24844 172 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 GPR12P47775 334 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 LSAMPQ13449 338 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 KHDC1LQ5JSQ8 128 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 IL1F10Q8WWZ1 152 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 EDARADDQ8WWZ3 215 aa16.96■□□□□ 0.31
CCDC78-215ENST00000538176 ZBTB25P24278 435 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 SOX6P35712 828 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 VEGFCP49767 419 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 GNMTQ14749 295 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 PNLIPRP3Q17RR3 467 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF833PQ6ZTB9 187 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF329Q86UD4 541 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 ODF3L1Q8IXM7 274 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 FAM71E2Q8N5Q1 922 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 SETD6Q8TBK2 473 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 FCGR1BQ92637 280 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 CENPOQ9BU64 300 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 C12orf4Q9NQ89 552 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 AK3Q9UIJ7 227 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF580Q9UK33 172 aa16.95■□□□□ 0.3
CCDC78-215ENST00000538176 A0A0A6YYD4 124 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 FOXI3A8MTJ6 420 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF736B4DX44 427 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 TMEM50BP56557 158 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 MRPS15P82914 257 aaKnown RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 SSX1Q16384 188 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 C10orf99Q6UWK7 81 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 PHF21AQ96BD5 680 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 RCC1LQ96I51 464 aaKnown RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 NOL4LQ96MY1 436 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 CMSS1Q9BQ75 279 aaKnown RBP16.94■□□□□ 0.3
CCDC78-215ENST00000538176 KCNK15Q9H427 330 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 SLC23A1Q9UHI7 598 aa16.94■□□□□ 0.3
CCDC78-215ENST00000538176 NOTCH3Q9UM47 2321 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 LDLRAD4O15165 306 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 OR5H8P0DN80 308 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 RPL23AP62750 156 aaKnown RBP16.93■□□□□ 0.3
CCDC78-215ENST00000538176 OXLD1Q5BKU9 147 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 NABP2Q9BQ15 211 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF251Q9BRH9 671 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 GPR61Q9BZJ8 451 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 Q9N2K0 584 aa16.93■□□□□ 0.3
CCDC78-215ENST00000538176 METTL21EPA6NDL7 271 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 IFITM5A6NNB3 132 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 HSPA12AO43301 675 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 RAB3BP20337 219 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 GADD45AP24522 165 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 MC5RP33032 325 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 F2RL1P55085 397 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 CLDN12P56749 244 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 HLA-DRB3P79483 266 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 MMDQ15546 238 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 UBE2UQ5VVX9 321 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 PTX4Q96A99 478 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 ARHGAP5-AS1Q96IT6 56 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 PECRQ9BY49 303 aa16.92■□□□□ 0.3
CCDC78-215ENST00000538176 NECAP2Q9NVZ3 263 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms