RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZNF160Q9HCG1 818 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ALKBH4Q9NXW9 302 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 A0A1B0GX78 115 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 CELA2BP08218 269 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ESDP10768 282 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 FXYD4P59646 89 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 QRFPP83859 136 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 EXT1Q16394 746 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 PLAC9Q5JTB6 97 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF695Q8IW36 515 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 OR2Y1Q8NGV0 311 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 FOXN4Q96NZ1 517 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 C22orf46C9J442 243 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 TNFSF12O43508 249 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 SAXO1Q8IYX7 474 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 NECAP2Q9NVZ3 263 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 PEF1Q9UBV8 284 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 RHBDD3Q9Y3P4 386 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 TICRRQ7Z2Z1 1910 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 PCNX2A6NKB5 2137 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 DPRXA6NFQ7 191 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 MLF1P58340 268 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 HERV-K104P61576 105 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 ZIC1Q15915 447 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 BAHD1Q8TBE0 780 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 TSPAN32Q96QS1 320 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF581Q9P0T4 197 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 UBE2J1Q9Y385 318 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 TRAPPC2LH3BP13 241 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 SLC16A7O60669 478 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 RAD51DO75771 328 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 PMCHP20382 165 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 CD226Q15762 336 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 C18orf12Q96KH6 178 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 ATP6V0BQ99437 205 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 ELOVL5Q9NYP7 299 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 WASHC3Q9Y3C0 194 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 PLXND1Q9Y4D7 1925 aa9.38□□□□□ -0.91
CLSTN3-207ENST00000537408 SIRPB1O00241 398 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 PRRX1P54821 245 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 ERASQ7Z444 233 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 CALHM1Q8IU99 346 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF519Q8TB69 540 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 GAGE10A6NGK3 116 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 KITLGP21583 273 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 SELENOVP59797 346 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 FMODQ06828 376 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 RPL18Q07020 188 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 B4GALT7Q9UBV7 327 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 NOTCH4Q99466 2003 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 ODAMA1E959 279 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 C21orf140B9A014 251 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 RAB29O14966 203 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 RAMP3O60896 148 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 PGCP20142 388 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 MDH2P40926 338 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 HLA-DRB5Q30154 266 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 NEIL1Q96FI4 390 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 RAXQ9Y2V3 346 aa9.37□□□□□ -0.91
CLSTN3-207ENST00000537408 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 GOSR1O95249 250 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 MPZL1O95297 269 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 OR10J4P0C629 311 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF90Q03938 601 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF154Q13106 437 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 FAM69BQ5VUD6 431 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 TCF24Q7RTU0 167 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 PRR22Q8IZ63 422 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 PCNTO95613 3336 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 TMEM171Q8WVE6 324 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 ASB10Q8WXI3 467 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 DAPP1Q9UN19 280 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 IGHV5-10-1A0A0J9YXX1 117 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 HAND1O96004 215 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 CCL4P13236 92 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 FOXL1Q12952 345 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 ACSF3Q4G176 576 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 MUC15Q8N387 334 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 FER1L6-AS1Q8NA97 138 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 GMPPAQ96IJ6 420 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms