RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-213	ENST00000536843	VSTM2B	A6NLU5	285 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	MLNR	O43193	412 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	TNFSF12	O43508	249 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	SPRY1	O43609	319 aa	Predicted RBP	13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	SLC25A6	P12236	298 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	PTGDS	P41222	190 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	COMP	P49747	757 aa	Predicted RBP	13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	SPIN3	Q5JUX0	258 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	LYSMD4	Q5XG99	296 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	BRICD5	Q6PL45	260 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	ZNF818P	Q6ZRF7	136 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	RNF138	Q8WVD3	245 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	CFAP54	Q96N23	3096 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	SLC45A2	Q9UMX9	530 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843	SHANK1	Q9Y566	2161 aa		13.32	□□□□□ -0.28
CHFR-213	ENST00000536843		A0A1W2PN81	502 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	CHRNA7	P36544	502 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	CDKN1A	P38936	164 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	YPEL3	P61236	119 aa	Predicted RBP	13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	ZXDA	P98168	799 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	FOXL1	Q12952	345 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	STPG4	Q8N801	248 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	DUSP23	Q9BVJ7	150 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	TP53TG3	Q9ULZ0	132 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	WIPI2	Q9Y4P8	454 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	HS3ST1	O14792	307 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	TRAF3IP2	O43734	574 aa	Predicted RBP	13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	ZFAND5	O76080	213 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	TOMM40	O96008	361 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	LINC00310	P59036	64 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	MMD	Q15546	238 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	PIGY	Q3MUY2	71 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	GAPT	Q8N292	157 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	RPP25L	Q8N5L8	163 aa	Known RBP	13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	VN1R17P	Q8TDU5	208 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	SAP25	Q8TEE9	199 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	WDR61	Q9GZS3	305 aa	Known RBP	13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	METTL7A	Q9H8H3	244 aa		13.31	□□□□□ -0.28
CHFR-213	ENST00000536843	KIAA2026	Q5HYC2	2103 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843		H0Y980	276 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	PDCD6	O75340	191 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	CNOT4	O95628	575 aa	Known RBP	13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	OR5G3	P0C626	314 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	ADM	P35318	185 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	ARL16	Q0P5N6	197 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	MYBPH	Q13203	477 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	HIST3H3	Q16695	136 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	OR4F5	Q8NH21	305 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	OR4F4	Q96R69	305 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	HSPB9	Q9BQS6	159 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	EXPH5	Q8NEV8	1989 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	CACNA1E	Q15878	2313 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	IGKV1-27	A0A075B6S5	117 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	ZNF814	B7Z6K7	855 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843		F5H5K5	113 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	CTRL	P40313	264 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	UBE2V1	Q13404	147 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	PLPPR5	Q32ZL2	321 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	CARD17	Q5XLA6	110 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	OSR2	Q8N2R0	312 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	KCNE4	Q8WWG9	221 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	OCIAD1	Q9NX40	245 aa		13.3	□□□□□ -0.28
CHFR-213	ENST00000536843	CHD3	Q12873	2000 aa	Known RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	MMP23A	O75900	390 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	IGKV1D-33	P01593	117 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	IGKV1-33	P01594	117 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	CEACAM8	P31997	349 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	HBG1	P69891	147 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	HBG2	P69892	147 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	TESK1	Q15569	626 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843		Q6ZS49	121 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	HAPLN4	Q86UW8	402 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	MRGPRD	Q8TDS7	321 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	PLA2G3	Q9NZ20	509 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	TIMM9	Q9Y5J7	89 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	MYO7B	Q6PIF6	2116 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843		A0A0G2JRQ6	117 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	GALR2	O43603	387 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	GDF9	O60383	454 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	NXPH2	O95156	264 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	OTX1	P32242	354 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	MALL	Q13021	153 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	ATP6V1F	Q16864	119 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	HLA-B	Q31612	363 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	SLC25A53	Q5H9E4	307 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	OR5AU1	Q8NGC0	362 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	NEIL1	Q96FI4	390 aa	Predicted RBP	13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	ELOVL5	Q9NYP7	299 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843	IL36G	Q9NZH8	169 aa		13.29	□□□□□ -0.28
CHFR-213	ENST00000536843		A8MXE2	369 aa		13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	WNT2	P09544	360 aa		13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	HNF1A	P20823	631 aa		13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	RPS18	P62269	152 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	MSMO1	Q15800	293 aa		13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.28	□□□□□ -0.28
CHFR-213	ENST00000536843	FAM180A	Q6UWF9	173 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms