RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RPRMQ9NS64 109 aa13.54□□□□□ -0.24
CHMP1A-202ENST00000535997 FAM90A26D6RGX4 464 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 CELA3BP08861 270 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF16P17020 682 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 ARG2P78540 354 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 MYPOPQ86VE0 399 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 FGFRL1Q8N441 504 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 DRAM1Q8N682 238 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 TMEM178AQ8NBL3 297 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 MBD3L1Q8WWY6 194 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 SIRT7Q9NRC8 400 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 URB1O60287 2271 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 NCOR1O75376 2440 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 TMEM210A6NLX4 147 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 H0YL77 283 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 AP4M1O00189 453 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 FBP1P09467 338 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 SELEP16581 610 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 ZNF525Q8N782 197 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 ZBTB34Q8NCN2 500 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 RSG1Q9BU20 258 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 PARD6GQ9BYG4 376 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 OR14J1Q9UGF5 321 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 R4GN57 208 aa13.53□□□□□ -0.24
CHMP1A-202ENST00000535997 LOC102723971A0A1B0GUV8 181 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 IAPPP10997 89 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 CBR1P16152 277 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 IDH3GP51553 393 aaPredicted RBP13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 ARL16Q0P5N6 197 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 FIP1L1Q6UN15 594 aaKnown RBP13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 DHRS13Q6UX07 377 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 SLC25A40Q8TBP6 338 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 KCNIP1Q9NZI2 227 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 KIAA2026Q5HYC2 2103 aa13.52□□□□□ -0.24
CHMP1A-202ENST00000535997 B4DEV8 164 aa13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 IGHV1-2P23083 117 aa13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 B2MP61769 119 aa13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 PSG7Q13046 419 aa13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 INO80CQ6PI98 192 aaPredicted RBP13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 CISD1Q9NZ45 108 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 MMP24Q9Y5R2 645 aa13.52□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF727A8MUV8 499 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 C1QTNF9BB2RNN3 333 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 ERVS71-1P61550 626 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 ALKBH6Q3KRA9 238 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 TCTEX1D2Q8WW35 142 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 PINX1Q96BK5 328 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 GALMQ96C23 342 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 BCL2L14Q9BZR8 327 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 HES4Q9HCC6 221 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 GNG13Q9P2W3 67 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 HAND1O96004 215 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 GRPP07492 148 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 NQO2P16083 231 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 RPS10P46783 165 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 GLIPR1P48060 266 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 SOX8P57073 446 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 ELOBQ15370 118 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 HES3Q5TGS1 186 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 HAPLN4Q86UW8 402 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 LILRB2Q8N423 598 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF645Q8N7E2 425 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 UBALD1Q8TB05 177 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 CACNA1DQ01668 2161 aa13.51□□□□□ -0.25
CHMP1A-202ENST00000535997 TMEM30CPA0ZSE6 113 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 SPANXN5Q5MJ07 72 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 WDR61Q9GZS3 305 aaKnown RBP13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 PSPNO60542 156 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 BCL2P10415 239 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 PNRC1Q12796 327 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 PMS2P11Q13670 270 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 KLF14Q8TD94 323 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 OR4C12Q96R67 309 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 P2RX4Q99571 388 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF251Q9BRH9 671 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
CHMP1A-202ENST00000535997 EIF2S3P41091 472 aaKnown RBP13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 TNFSF10P50591 281 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 ZNF726P1Q15940 193 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 Q6ZT83 130 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 FAM214BQ7L5A3 538 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 RCC1LQ96I51 464 aaKnown RBP13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 TOLLIPQ9H0E2 274 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 VSIRQ9H7M9 311 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
CHMP1A-202ENST00000535997 OOEPA6NGQ2 149 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 LYZL6O75951 148 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 RAB11AP62491 216 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
CHMP1A-202ENST00000535997 MSMO1Q15800 293 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms