RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PYHIN1Q6K0P9 492 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 MOB1BQ7L9L4 216 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 FAM71E2Q8N5Q1 922 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 CT45A3Q8NHU0 189 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 KCNG3Q8TAE7 436 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 DERL3Q96Q80 235 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 URM1Q9BTM9 101 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 MND1Q9BWT6 205 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 TMEM59Q9BXS4 323 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 OR51J1Q9H342 316 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 PLEKHJ1Q9NW61 149 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
CLSTN3-205ENST00000535452 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF736B4DX44 427 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 RAB29O14966 203 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 SLC31A2O15432 143 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 SC5DO75845 299 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 HLA-DRB1P01911 266 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 CD1AP06126 327 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 PPP1CCP36873 323 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 F2RL1P55085 397 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 CBX3Q13185 183 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF429Q86V71 674 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 BPIFB6Q8NFQ5 453 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 OR52L2PQ8NGH6 319 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 GGHQ92820 318 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 PGLYRP3Q96LB9 341 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 Q96M66 194 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 PRR25Q96S07 402 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 HSPB9Q9BQS6 159 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF581Q9P0T4 197 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
CLSTN3-205ENST00000535452 TRBV5-7A0A0A0MS05 114 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 A0A1W2PN81 502 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 OR5H14A6NHG9 310 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 SAP30O75446 220 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 RBBP9O75884 186 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 BPNT1O95861 308 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 PSMB8P28062 276 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 CHRNA7P36544 502 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 HSD17B12Q53GQ0 312 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF660Q6AZW8 331 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF439Q8NDP4 499 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 OR6Q1Q8NGQ2 317 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 OR5B12Q96R08 314 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 OR4C12Q96R67 309 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 MRPL20Q9BYC9 149 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 PLGRKTQ9HBL7 147 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 PLSCR3Q9NRY6 295 aa10.37□□□□□ -0.75
CLSTN3-205ENST00000535452 MAGEA13PA6NCF6 341 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 OVOL1O14753 267 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ARPC1BO15143 372 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ATP6V0E1O15342 81 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 LALBAP00709 142 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ZBTB25P24278 435 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 HTR2CP28335 458 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 RAB9AP51151 201 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF134P52741 427 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 C5orf64Q2M2E5 130 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ACSM3Q53FZ2 586 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 LY6G6FQ5SQ64 297 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 GAPTQ8N292 157 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 MRPL30Q8TCC3 161 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 PHYHIPQ92561 330 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 UFD1Q92890 307 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 TMED9Q9BVK6 235 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ELOVL1Q9BW60 279 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ANKRD60Q9BZ19 345 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ZMAT4Q9H898 229 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF221Q9UK13 617 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 FOXA2Q9Y261 457 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 WASHC3Q9Y3C0 194 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 A3GALT2U3KPV4 340 aa10.36□□□□□ -0.75
CLSTN3-205ENST00000535452 SAA2-SAA4A0A096LPE2 208 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 LINC01619G3V211 115 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 APOA2P02652 100 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 SAA2P0DJI9 122 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 CPEP16870 476 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 BLVRBP30043 206 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 PITPNAQ00169 270 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 RCN1Q15293 331 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 MED22Q15528 200 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 TRAM1Q15629 374 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF833PQ6ZTB9 187 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 OR6M1Q8NGM8 313 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 TSNAXQ99598 290 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 RNF5Q99942 180 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 NABP2Q9BQ15 211 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 PALMDQ9NP74 551 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms