RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 A0A0D9SEW6 157 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 B4DEV8 164 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 CLDN25C9JDP6 229 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 H7C2Y5 167 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 KLRC4O43908 158 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 MPZL2O60487 215 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 FBP1P09467 338 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 CCL3P10147 92 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 CD9P21926 228 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 PSMA1P25786 263 aaKnown RBP-0.62□□□□□ -2.51
COPB1-212ENST00000534771 PPP1CCP36873 323 aaKnown RBP-0.62□□□□□ -2.51
COPB1-212ENST00000534771 CD79BP40259 229 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 MT4P47944 62 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 SERPINB10P48595 397 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 EMP1P54849 157 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 C21orf59P57076 290 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 MLF1P58340 268 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 TMEM267Q0VDI3 215 aaPredicted RBP-0.62□□□□□ -2.51
COPB1-212ENST00000534771 MAPK14Q16539 360 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 TPRG1LQ5T0D9 272 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 HES3Q5TGS1 186 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 TMEM86AQ8N2M4 240 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 TEX9Q8N6V9 391 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 Q8N814 137 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 OPALINQ96PE5 141 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 RSPH9Q9H1X1 276 aaPredicted RBP-0.62□□□□□ -2.51
COPB1-212ENST00000534771 C11orf49Q9H6J7 331 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 ZC4H2Q9NQZ6 224 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 DIABLOQ9NR28 239 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 DDIT4Q9NX09 232 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 OR5AC2Q9NZP5 309 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 FLT4P35916 1363 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 SCAF11Q99590 1463 aaKnown RBP-0.62□□□□□ -2.51
COPB1-212ENST00000534771 STRCQ7RTU9 1775 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 ABCB11O95342 1321 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 TRAV14DV4A0A0A6YYC5 116 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 IGHV1-18A0A0C4DH31 117 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 LINC00862A6NCI5 91 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 MEIS3P1A6NDR6 274 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 ITGB1BP1O14713 200 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 CPLX1O14810 134 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 IGHV1-69P01742 117 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 SLC2A1P11166 492 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 HOXA6P31267 233 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 IFNGR2P38484 337 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 ATP5IP56385 69 aaPredicted RBP-0.63□□□□□ -2.51
COPB1-212ENST00000534771 GABARAPL2P60520 117 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 RAB2AP61019 212 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 FAM3AP98173 230 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 DNAJC3Q13217 504 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 PDGFRLQ15198 375 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 ALKBH6Q3KRA9 238 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 BEX5Q5H9J7 111 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 HENMT1Q5T8I9 393 aaKnown RBP-0.63□□□□□ -2.51
COPB1-212ENST00000534771 FAM19A3Q7Z5A8 133 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 FAM228AQ86W67 206 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 CNEP1R1Q8N9A8 125 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 OR1L8Q8NGR8 309 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 CA5BP1Q8WTZ4 195 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 NRGNQ92686 78 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 FBXO32Q969P5 355 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 GALMQ96C23 342 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 APOL4Q9BPW4 351 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 CHID1Q9BWS9 393 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 ARMC7Q9H6L4 198 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 METTL17Q9H7H0 456 aaPredicted RBP-0.63□□□□□ -2.51
COPB1-212ENST00000534771 CISHQ9NSE2 258 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 MYEF2Q9P2K5 600 aaKnown RBP-0.63□□□□□ -2.51
COPB1-212ENST00000534771 JPT1Q9UK76 154 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 TBL2Q9Y4P3 447 aaKnown RBP-0.63□□□□□ -2.51
COPB1-212ENST00000534771 TIMM9Q9Y5J7 89 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 ADGRB2O60241 1585 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 BIRC6Q9NR09 4857 aa-0.63□□□□□ -2.51
COPB1-212ENST00000534771 MYO15BQ96JP2 1530 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CACNA1CQ13936 2221 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 COL4A5P29400 1685 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 TONSLQ96HA7 1378 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 GOLGA6L10A6NI86 522 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 TMEM212A6NML5 194 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 IBA57-AS1B1ANH7 110 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 H0Y8G0 127 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 BOLA2-SMG1P6H3BVE0 249 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 K7EIL1 84 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 M0R1B8 84 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 TXNDC9O14530 226 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 FGF16O43320 207 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 HSBP1O75506 76 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 TRAPPC6AO75865 159 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CRYBA1P05813 215 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 UBCP0CG48 685 aaKnown RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 CCL5P13501 91 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 PSMB8P28062 276 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 TSPOP30536 169 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 ALDH3A1P30838 453 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 ZNF93P35789 620 aaPredicted RBP-0.64□□□□□ -2.51
COPB1-212ENST00000534771 SULT1E1P49888 294 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 ZNF137PP52743 207 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 BPIFB3P59826 476 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 ATP6V0D1P61421 351 aa-0.64□□□□□ -2.51
COPB1-212ENST00000534771 C12orf74Q32Q52 190 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms