RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ABHD13Q7L211 337 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 C6orf120Q7Z4R8 191 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 THOC6Q86W42 341 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 OR6V1Q8N148 313 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 KCNRGQ8N5I3 272 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR11G2Q8NGC1 345 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR4A4PQ8NGN8 299 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR13C8Q8NGS7 320 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR9A2Q8NGT5 310 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR2Y1Q8NGV0 311 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 LYPD6BQ8NI32 183 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 STOML3Q8TAV4 291 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PIGXQ8TBF5 258 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 MARCH1Q8TCQ1 289 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SKA2Q8WVK7 121 aaPredicted RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 ITLN1Q8WWA0 313 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 DLX4Q92988 240 aaPredicted RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 NEIL2Q969S2 332 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 C8orf44Q96CB5 159 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 RAB3CQ96E17 227 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 WDR34Q96EX3 536 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PPP1R36Q96LQ0 422 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 JSRP1Q96MG2 331 aaPredicted RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 PRAP1Q96NZ9 151 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TNFRSF13CQ96RJ3 184 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CLCC1Q96S66 551 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TSNAXQ99598 290 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 SLC6A7Q99884 636 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TMEM208Q9BTX3 173 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 NUDT9Q9BW91 350 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SCRT1Q9BWW7 348 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 POTEKPQ9BYX7 375 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TLNRD1Q9H1K6 362 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CXXC4Q9H2H0 198 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PTGES2Q9H7Z7 377 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 WDR54Q9H977 334 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PLEKHA3Q9HB20 300 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 ADAP2Q9NPF8 381 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TMEM138Q9NPI0 162 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SIRT7Q9NRC8 400 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SMCO4Q9NRQ5 59 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SLC25A37Q9NYZ2 338 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 VAPAQ9P0L0 249 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OPN4Q9UHM6 478 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FLVCR2Q9UPI3 526 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 MOKQ9UQ07 419 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SLC22A14Q9Y267 594 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SLC35A3Q9Y2D2 325 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 EXOSC1Q9Y3B2 195 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 GOLT1BQ9Y3E0 138 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FBXO7Q9Y3I1 522 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OARD1Q9Y530 152 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FLVCR1Q9Y5Y0 555 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 CENPEQ02224 2701 aa2.59□□□□□ -2
USP48-215ENST00000534705 HEATR1Q9H583 2144 aaKnown RBP2.59□□□□□ -2
USP48-215ENST00000534705 NAV2Q8IVL1 2488 aa2.58□□□□□ -2
USP48-215ENST00000534705 A0A0A6YYD4 124 aa2.58□□□□□ -2
USP48-215ENST00000534705 KBTBD11-OT1A0A1B0GTJ5 212 aa2.58□□□□□ -2
USP48-215ENST00000534705 TMEM269A0A1B0GVZ9 245 aa2.58□□□□□ -2
USP48-215ENST00000534705 GNG14A0A1W2PPG7 69 aa2.58□□□□□ -2
USP48-215ENST00000534705 NAP1L6A6NFF2 107 aa2.58□□□□□ -2
USP48-215ENST00000534705 RPL37AP8A6NKH3 93 aa2.58□□□□□ -2
USP48-215ENST00000534705 SRRM4A7MD48 611 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 FOXI3A8MTJ6 420 aaPredicted RBP2.58□□□□□ -2
USP48-215ENST00000534705 SEC14L6B5MCN3 397 aa2.58□□□□□ -2
USP48-215ENST00000534705 G3V4G9 280 aa2.58□□□□□ -2
USP48-215ENST00000534705 AZIN1O14977 448 aa2.58□□□□□ -2
USP48-215ENST00000534705 OR2T1O43869 369 aa2.58□□□□□ -2
USP48-215ENST00000534705 RAMP3O60896 148 aa2.58□□□□□ -2
USP48-215ENST00000534705 GATBO75879 557 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 RPP14O95059 124 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 CDRT1O95170 752 aa2.58□□□□□ -2
USP48-215ENST00000534705 TMEM50AO95807 157 aa2.58□□□□□ -2
USP48-215ENST00000534705 ACTL6AO96019 429 aa2.58□□□□□ -2
USP48-215ENST00000534705 F10P00742 488 aa2.58□□□□□ -2
USP48-215ENST00000534705 ANXA5P08758 320 aa2.58□□□□□ -2
USP48-215ENST00000534705 NBEAP1P0C6P0 100 aa2.58□□□□□ -2
USP48-215ENST00000534705 COX6A1P12074 109 aa2.58□□□□□ -2
USP48-215ENST00000534705 SLC25A4P12235 298 aa2.58□□□□□ -2
USP48-215ENST00000534705 NR2C1P13056 603 aa2.58□□□□□ -2
USP48-215ENST00000534705 CCL2P13500 99 aa2.58□□□□□ -2
USP48-215ENST00000534705 HLA-GP17693 338 aa2.58□□□□□ -2
USP48-215ENST00000534705 TUBG1P23258 451 aa2.58□□□□□ -2
USP48-215ENST00000534705 PSMB6P28072 239 aa2.58□□□□□ -2
USP48-215ENST00000534705 PPP2R1BP30154 601 aa2.58□□□□□ -2
USP48-215ENST00000534705 MPIP34949 423 aa2.58□□□□□ -2
USP48-215ENST00000534705 CD200P41217 278 aa2.58□□□□□ -2
USP48-215ENST00000534705 CCR6P51684 374 aa2.58□□□□□ -2
USP48-215ENST00000534705 DIO3P55073 304 aa2.58□□□□□ -2
USP48-215ENST00000534705 WNT4P56705 351 aa2.58□□□□□ -2
USP48-215ENST00000534705 CLDN18P56856 261 aa2.58□□□□□ -2
USP48-215ENST00000534705 RPS20P60866 119 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 RPL27P61353 136 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 RPS15AP62244 130 aaKnown RBP2.58□□□□□ -2
USP48-215ENST00000534705 DEFA5Q01523 94 aa2.58□□□□□ -2
USP48-215ENST00000534705 KLRB1Q12918 225 aa2.58□□□□□ -2
USP48-215ENST00000534705 TSPAN31Q12999 210 aa2.58□□□□□ -2
USP48-215ENST00000534705 SKP2Q13309 424 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms