RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ARHGAP5-AS1Q96IT6 56 aa9.95□□□□□ -0.82
USF1-211ENST00000534633 ETAA1Q9NY74 926 aa9.95□□□□□ -0.82
USF1-211ENST00000534633 HSF4Q9ULV5 492 aa9.95□□□□□ -0.82
USF1-211ENST00000534633 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
USF1-211ENST00000534633 NAPSAO96009 420 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 IL1AP01583 271 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 FAM106CPP0CH98 169 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 RAB6AP20340 208 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 GLP1RP43220 463 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 DCTN2Q13561 401 aaKnown RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 THNSL2Q86YJ6 484 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 MRPL41Q8IXM3 137 aaKnown RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 OR9G1Q8NH87 305 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 UBALD1Q8TB05 177 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 NEK7Q8TDX7 302 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 KIRREL1Q96J84 757 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 NEDD4LQ96PU5 975 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 HDHD3Q9BSH5 251 aaPredicted RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 URM1Q9BTM9 101 aaKnown RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 PECRQ9BY49 303 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 MBNL3Q9NUK0 354 aaKnown RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
USF1-211ENST00000534633 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
USF1-211ENST00000534633 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 C12orf77C9JDV5 145 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 CA11O75493 328 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 GZMHP20718 246 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 NFYBP25208 207 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 SLC6A1P30531 599 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
USF1-211ENST00000534633 RPL5P46777 297 aaKnown RBP9.93□□□□□ -0.82
USF1-211ENST00000534633 CD69Q07108 199 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 IDNKQ5T6J7 187 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 ZNF880Q6PDB4 577 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 ETV3LQ6ZN32 361 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 GPR141Q7Z602 305 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 LGALS14Q8TCE9 139 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 CHPT1Q8WUD6 406 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 TOMM40LQ969M1 308 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 SLC25A46Q96AG3 418 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 RPEQ96AT9 228 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 SLC25A38Q96DW6 304 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 B9D2Q9BPU9 175 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 MCRIP2Q9BUT9 160 aaKnown RBP9.93□□□□□ -0.82
USF1-211ENST00000534633 PLEKHJ1Q9NW61 149 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 AK3Q9UIJ7 227 aa9.93□□□□□ -0.82
USF1-211ENST00000534633 ELF5Q9UKW6 265 aaPredicted RBP9.93□□□□□ -0.82
USF1-211ENST00000534633 J3QR06 171 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 FGF16O43320 207 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 ORC5O43913 435 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 IGHV3-7P01780 117 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 SNRNP70P08621 437 aaKnown RBP9.92□□□□□ -0.82
USF1-211ENST00000534633 SERPINB10P48595 397 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 THBS3P49746 956 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 RPL23AP62750 156 aaKnown RBP9.92□□□□□ -0.82
USF1-211ENST00000534633 ZNF329Q86UD4 541 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 OR56B1Q8NGI3 324 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 OR10R2Q8NGX6 335 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 ARL11Q969Q4 196 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 ZFP57Q9NU63 452 aa9.92□□□□□ -0.82
USF1-211ENST00000534633 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
USF1-211ENST00000534633 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 MFNGO00587 321 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 GNB3P16520 340 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 RAB7AP51149 207 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 SCAND1P57086 179 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 MADCAM1Q13477 382 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 SPCS2Q15005 226 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 LTC4SQ16873 150 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 OR8H3Q8N146 312 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 COMMD1Q8N668 190 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 DRAM1Q8N682 238 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 C5orf56Q8N8D9 126 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 OR10A7Q8NGE5 316 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 RAB3CQ96E17 227 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 ATG5Q9H1Y0 275 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 TAF9BQ9HBM6 251 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 ZMAT5Q9UDW3 170 aaKnown RBP9.91□□□□□ -0.82
USF1-211ENST00000534633 TRAPPC2LQ9UL33 140 aa9.91□□□□□ -0.82
USF1-211ENST00000534633 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 SERPINE3A8MV23 424 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 NUDT19A8MXV4 375 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 IGHG2P01859 326 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 HBZP02008 142 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 HIST1H1DP16402 221 aaKnown RBP9.9□□□□□ -0.82
USF1-211ENST00000534633 TMEM11P17152 192 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 MYCNOSP40205 109 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 RANBP1P43487 201 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 ZNF134P52741 427 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 HES1Q14469 280 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 HMGN3Q15651 99 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 CDNFQ49AH0 187 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 CLVS1Q8IUQ0 354 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms